Human (GRCh38.p14)
Description

SZT2 subunit of KICSTOR complex [Source:HGNC Symbol;Acc:HGNC:29040]

Gene Synonyms

C1ORF84, FLJ10387, FLJ34502, KIAA0467, KICS1, RP11-506B15.1, SZT2A, SZT2B

Location
About this transcript

This transcript has 18 exons, is annotated with 1 domain and feature, is associated with 4525 variant alleles and maps to 600 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000634258.3SZT2-210141363432aaENSP00000489255.1
 
Protein coding
CCDS90935Q5T011-1 NM_001365999.1MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:5
ENST00000562955.2SZT2-209139683375aaENSP00000457168.1
 
Protein coding
CCDS30694Q5T011-5 -GENCODE basicTSL:5
ENST00000372450.8SZT2-2021191178aaENSP00000361528.4
 
Protein coding
Q5T011-7 -GENCODE basicTSL:1
ENST00000470139.1SZT2-2054098597aaENSP00000492726.1
 
Nonsense mediated decay
A0A1W2PRY5 -TSL:2CDS 5' incomplete
ENST00000406439.7SZT2-2032198168aaENSP00000386070.2
 
Nonsense mediated decay
A0A0C4DG05 -TSL:2
ENST00000639852.1SZT2-2161314315aaENSP00000492385.1
 
Nonsense mediated decay
A0A1W2PQY2 -TSL:5CDS 5' incomplete
ENST00000649403.1SZT2-2195296No protein-
 
Protein coding CDS not defined
---
ENST00000471177.1SZT2-207574No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000470897.2SZT2-206468No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000648058.1SZT2-2187430No protein-
 
Retained intron
---
ENST00000460536.1SZT2-2044286No protein-
 
Retained intron
--TSL:2
ENST00000638263.1SZT2-2114248No protein-
 
Retained intron
--TSL:5
ENST00000638631.1SZT2-2122574No protein-
 
Retained intron
--TSL:5
ENST00000640484.1SZT2-2172266No protein-
 
Retained intron
--TSL:5
ENST00000639197.1SZT2-2152204No protein-
 
Retained intron
--TSL:NA
ENST00000357658.4SZT2-2011601No protein-
 
Retained intron
--TSL:1
ENST00000478140.1SZT2-208543No protein-
 
Retained intron
--TSL:2
ENST00000638642.1SZT2-213360No protein-
 
Retained intron
--TSL:3
ENST00000638769.1SZT2-214307No protein-
 
Retained intron
--TSL:3
Statistics

Exons: 18, Coding exons: 13, Transcript length: 4,098 bps, Translation length: 597 residues

Transcript Support Level (TSL)

TSL:2

Incomplete CDS

CDS 5' incomplete

Version

ENST00000470139.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.