Transcript: ENST00000489513.1 TAP1-220

Description

transporter 1, ATP binding cassette subfamily B member [Source:HGNC Symbol;Acc:HGNC:43]

Gene Synonyms

ABCB2, D6S114E, PSF1, RING4

Location

Scaffold HSCHR6_MHC_SSTO_CTG1: 4,244,461-4,249,392 reverse strand.

About this transcript

This transcript has 5 exons and maps to 1935 oligo probes.

Gene

This transcript is a product of gene ENSG00000224748.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq Match	Flags
ENST00000428324.2	TAP1-218	2959	808aa	ENSP00000412933.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A140T9T7	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000489513.1	TAP1-220	2540	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000470021.1	TAP1-219	1031	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 2,540 bps,

Transcript Support Level (TSL)

TSL:2

Version

ENST00000489513.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENST00000489513.1 TAP1-220

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Transcript: ENST00000489513.1 TAP1-220

Summary

About Us

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