Human (GRCh38.p14)
Description

SMG7 nonsense mediated mRNA decay factor [Source:HGNC Symbol;Acc:HGNC:16792]

Gene Synonyms

C1ORF16, EST1C, KIAA0250, SGA56M, SMG-7

About this transcript

This transcript has 23 exons, is annotated with 25 domains and features, is associated with 33662 variant alleles and maps to 720 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000688051.1SMG7-21659461187aaENSP00000510175.1
 
Protein coding
CCDS91123A0A8I5KYV3 NM_001375584.1MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P4
ENST00000685780.1SMG7-21562041216aaENSP00000508915.1
 
Protein coding
CCDS91124A0A8I5KSL3 -GENCODE basicAPPRIS ALT1
ENST00000367537.7SMG7-20259701170aaENSP00000356507.3
 
Protein coding
CCDS81410E9PD50 -GENCODE basicTSL:5
ENST00000347615.6SMG7-20157881137aaENSP00000340766.2
 
Protein coding
CCDS1355Q92540-1 -GENCODE basicAPPRIS ALT1TSL:1
ENST00000515829.6SMG7-21456291091aaENSP00000421358.2
 
Protein coding
CCDS53444Q92540-2 -GENCODE basicAPPRIS ALT1TSL:1
ENST00000507469.5SMG7-21246421178aaENSP00000425133.1
 
Protein coding
CCDS41445Q92540-4 -GENCODE basicTSL:1
ENST00000508461.5SMG7-21339851145aaENSP00000426915.1
 
Protein coding
CCDS53445Q92540-5 -GENCODE basicTSL:2
ENST00000419169.5SMG7-2042483756aaENSP00000388390.1
 
Protein coding
B1ALB4 -TSL:2CDS 3' incomplete
ENST00000502375.1SMG7-21056656aaENSP00000422056.1
 
Protein coding
D6R9J3 -TSL:5CDS 3' incomplete
ENST00000440812.7SMG7-2051190184aaENSP00000410254.3
 
Nonsense mediated decay
E9PEK3 -TSL:5
ENST00000444547.6SMG7-20658073aaENSP00000400220.2
 
Nonsense mediated decay
E9PBK2 -TSL:4
ENST00000507406.1SMG7-211582No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000495321.1SMG7-209556No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000493045.1SMG7-207673No protein-
 
Retained intron
--TSL:3
ENST00000493609.1SMG7-208624No protein-
 
Retained intron
--TSL:3
ENST00000367538.1SMG7-203328No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 23, Coding exons: 23, Transcript length: 4,642 bps, Translation length: 1,178 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q92540

CCDS

This transcript is a member of the Human CCDS set: CCDS41445

Transcript Support Level (TSL)

TSL:1

Version

ENST00000507469.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.