Human (GRCh38.p14)
Description

PDZ and LIM domain 5 [Source:HGNC Symbol;Acc:HGNC:17468]

Gene Synonyms

ENH, LIM

Location
About this transcript

This transcript has 6 exons, is associated with 52965 variant alleles and maps to 275 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000317968.9PDLIM5-2016043596aaENSP00000321746.4
 
Protein coding
CCDS3641Q96HC4-1 NM_006457.5MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P3TSL:1
ENST00000615540.4PDLIM5-2226219625aaENSP00000480359.1
 
Protein coding
CCDS58916Q96HC4-6 -GENCODE basicTSL:1
ENST00000437932.5PDLIM5-2065713271aaENSP00000398469.2
 
Protein coding
CCDS75166A0A0A0MSP3 -GENCODE basicTSL:5
ENST00000514743.5PDLIM5-2193356625aaENSP00000424360.1
 
Protein coding
CCDS58916Q96HC4-6 -GENCODE basicTSL:2
ENST00000542407.5PDLIM5-2212979487aaENSP00000442187.2
 
Protein coding
CCDS47102Q96HC4-4 -GENCODE basicAPPRIS ALT1TSL:1
ENST00000503974.5PDLIM5-2072081483aaENSP00000424297.1
 
Protein coding
CCDS58917Q96HC4-7 -GENCODE basicTSL:2
ENST00000380180.7PDLIM5-2052020234aaENSP00000369527.3
 
Protein coding
CCDS47103Q96HC4-2 -GENCODE basicTSL:1
ENST00000318007.9PDLIM5-2021960214aaENSP00000322021.5
 
Protein coding
CCDS47104Q96HC4-3 -GENCODE basicTSL:1
ENST00000508216.5PDLIM5-2101794234aaENSP00000426804.1
 
Protein coding
CCDS47103Q96HC4-2 -GENCODE basicTSL:2
ENST00000359265.8PDLIM5-2031189136aaENSP00000352210.4
 
Protein coding
CCDS58915Q96HC4-5 -GENCODE basicTSL:1
ENST00000513341.5PDLIM5-218794196aaENSP00000429577.1
 
Protein coding
H0YBI4 -TSL:3CDS 5' incomplete
ENST00000510099.5PDLIM5-214554176aaENSP00000486834.1
 
Protein coding
A0A0D9SFR4 -TSL:4CDS 3' incomplete
ENST00000504489.3PDLIM5-20853838aaENSP00000423009.1
 
Protein coding
D6RAA1 -GENCODE basicTSL:4
ENST00000512274.1PDLIM5-21737247aaENSP00000426379.1
 
Protein coding
D6RGG6 -GENCODE basicTSL:2
ENST00000627587.2PDLIM5-223185339aaENSP00000486938.1
 
Nonsense mediated decay
A0A0D9SFW3 -TSL:2
ENST00000506632.2PDLIM5-209907231aaENSP00000422528.1
 
Nonsense mediated decay
H0Y8Y3 -TSL:3CDS 5' incomplete
ENST00000509357.5PDLIM5-21355485aaENSP00000422833.1
 
Nonsense mediated decay
H0Y929 -TSL:5CDS 5' incomplete
ENST00000380176.7PDLIM5-2043098No protein-
 
Protein coding CDS not defined
--TSL:1
ENST00000514830.5PDLIM5-220802No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000511586.5PDLIM5-215547No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000508531.1PDLIM5-211480No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000511767.3PDLIM5-216463No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000509333.5PDLIM5-212743No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 6, Coding exons: 0, Transcript length: 802 bps,

Transcript Support Level (TSL)

TSL:2

Version

ENST00000514830.5

Type

Protein coding CDS not defined

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.