Human (GRCh38.p14)
Description

SRY-box transcription factor 6 [Source:HGNC Symbol;Acc:HGNC:16421]

Location
About this transcript

This transcript has 5 exons, is associated with 25735 variant alleles and maps to 91 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000683767.1SOX6-2199304828aaENSP00000507545.1
 
Protein coding
CCDS91447P35712-1 NM_001367873.1MANE SelectEnsembl CanonicalGENCODE basicAPPRIS ALT2
ENST00000655819.1SOX6-2188979804aaENSP00000499737.1
 
Protein coding
P35712-2 -GENCODE basicAPPRIS ALT2
ENST00000396356.7SOX6-2028865808aaENSP00000379644.3
 
Protein coding
CCDS7821P35712-3 -GENCODE basicAPPRIS P4TSL:1
ENST00000316399.10SOX6-2018808808aaENSP00000324948.6
 
Protein coding
CCDS7821P35712-3 -GENCODE basicAPPRIS P4TSL:5
ENST00000528252.5SOX6-2102707801aaENSP00000432134.1
 
Protein coding
CCDS53604P35712-4 -GENCODE basicAPPRIS ALT2TSL:2
ENST00000527619.6SOX6-2082699801aaENSP00000434455.2
 
Protein coding
CCDS53604P35712-4 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000528429.5SOX6-2112656828aaENSP00000433233.1
 
Protein coding
CCDS91447P35712-1 -GENCODE basicAPPRIS ALT2TSL:1
ENST00000533411.5SOX6-215586159aaENSP00000436170.1
 
Protein coding
E9PQL4 -TSL:4CDS 3' incomplete
ENST00000529469.1SOX6-21254979aaENSP00000432596.1
 
Protein coding
E9PQ67 -TSL:4CDS 3' incomplete
ENST00000526673.1SOX6-207534139aaENSP00000434892.1
 
Protein coding
E9PN02 -TSL:3CDS 3' incomplete
ENST00000530378.5SOX6-2131818159aaENSP00000432577.1
 
Nonsense mediated decay
E9PQ78 -TSL:2
ENST00000533658.5SOX6-2161202No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000524520.5SOX6-203709No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000525835.5SOX6-206660No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000527840.1SOX6-209574No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000525259.1SOX6-205574No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000524650.1SOX6-204534No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000531297.1SOX6-214429No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000533870.1SOX6-2177224No protein-
 
Retained intron
--TSL:5
Statistics

Exons: 5, Coding exons: 0, Transcript length: 534 bps,

Transcript Support Level (TSL)

TSL:4

Version

ENST00000524650.1

Type

Protein coding CDS not defined

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.