Human (GRCh38.p14)
Description

prominin 1 [Source:HGNC Symbol;Acc:HGNC:9454]

Gene Synonyms

AC133, CD133, CORD12, MCDR2, PROML1, RP41, STGD4

Location
About this transcript

This transcript has 26 exons, is annotated with 12 domains and features, is associated with 50506 variant alleles and maps to 747 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000447510.7PROM1-2014021865aaENSP00000415481.2
 
Protein coding
CCDS47029O43490-1 NM_006017.3MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P3TSL:1
ENST00000505450.5PROM1-2064349856aaENSP00000426090.1
 
Protein coding
CCDS54746O43490-2 -GENCODE basicTSL:1
ENST00000508167.5PROM1-2074014856aaENSP00000427346.1
 
Protein coding
CCDS54746O43490-2 -GENCODE basicTSL:1
ENST00000510224.5PROM1-2104006865aaENSP00000426809.1
 
Protein coding
CCDS47029O43490-1 -GENCODE basicAPPRIS P3TSL:5
ENST00000539194.6PROM1-2193838834aaENSP00000443620.1
 
Protein coding
CCDS54747O43490-6 -GENCODE basicAPPRIS ALT2TSL:5
ENST00000540805.6PROM1-2202803833aaENSP00000438045.2
 
Protein coding
CCDS93483O43490-4 -GENCODE basicTSL:5
ENST00000675377.1PROM1-2212529842aaENSP00000502545.1
 
Protein coding
CCDS54748O43490-7 -GENCODE basicAPPRIS ALT2
ENST00000675613.1PROM1-2222478825aaENSP00000501741.1
 
Protein coding
CCDS93482O43490-5 -GENCODE basic
ENST00000514967.5PROM1-21856814aaENSP00000423793.1
 
Protein coding
D6RCC3 -TSL:5CDS 3' incomplete
ENST00000508940.1PROM1-20956740aaENSP00000422704.1
 
Protein coding
D6RBI0 -TSL:4CDS 3' incomplete
ENST00000508322.1PROM1-20855157aaENSP00000425927.1
 
Protein coding
D6RIF3 -TSL:3CDS 3' incomplete
ENST00000513946.2PROM1-216392777aaENSP00000424738.2
 
Nonsense mediated decay
H0Y9Q5 -TSL:3
ENST00000511153.5PROM1-211159554aaENSP00000424569.1
 
Nonsense mediated decay
H0Y9M7 -TSL:1CDS 5' incomplete
ENST00000503884.5PROM1-20462265aaENSP00000423860.1
 
Nonsense mediated decay
H0Y9D4 -TSL:3CDS 5' incomplete
ENST00000502943.1PROM1-203760No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000502501.1PROM1-202568No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000513108.1PROM1-214565No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000512304.2PROM1-213540No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000514693.5PROM1-217530No protein-
 
Protein coding CDS not defined
--TSL:4
ENST00000504842.5PROM1-205507No protein-
 
Protein coding CDS not defined
--TSL:5
ENST00000511270.1PROM1-212291No protein-
 
Protein coding CDS not defined
--TSL:3
ENST00000513448.5PROM1-2152042No protein-
 
Retained intron
--TSL:1
Statistics

Exons: 26, Coding exons: 24, Transcript length: 3,838 bps, Translation length: 834 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O43490

CCDS

This transcript is a member of the Human CCDS set: CCDS54747

Transcript Support Level (TSL)

TSL:5

Version

ENST00000539194.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Annotation Attributes

RNA-Seq supported partial [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.