Transcript: ENST00000540988.1 CLECL1P-203

Description

C-type lectin like 1, pseudogene [Source:NCBI gene (formerly Entrezgene);Acc:160365]

Gene Synonyms

CLECL1, DCAL-1, DCAL1

Location

Chromosome 12: 9,715,860-9,722,661 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 2677 variant alleles and maps to 230 oligo probes.

Gene

This transcript is a product of gene ENSG00000293488.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000702603.1	CLECL1P-205	578	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000540988.1	CLECL1P-203	1069	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000327839.4	CLECL1P-202	674	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000542530.5	CLECL1P-204	557	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 1,069 bps,

Transcript Support Level (TSL)

TSL:1

Version

ENST00000540988.1

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

overlaps pseudogene [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000540988.1 CLECL1P-203

Summary

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Transcript: ENST00000540988.1 CLECL1P-203

Summary

About Us

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