Human (GRCh38.p14)
Description

cleavage and polyadenylation specific factor 1 [Source:HGNC Symbol;Acc:HGNC:2324]

Gene Synonyms

CPSF160

About this transcript

This transcript has 38 exons, is annotated with 24 domains and features, is associated with 12845 variant alleles and maps to 1060 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000616140.2CPSF1-21244801443aaENSP00000484669.1
 
Protein coding
CCDS34966Q10570 NM_013291.3MANE SelectEnsembl CanonicalGENCODE basicAPPRIS P1TSL:1
ENST00000620219.4CPSF1-21344621443aaENSP00000478145.1
 
Protein coding
CCDS34966Q10570 -GENCODE basicAPPRIS P1TSL:1
ENST00000531727.5CPSF1-207704204aaENSP00000483775.1
 
Protein coding
A0A087X101 -GENCODE basicTSL:3
ENST00000532935.5CPSF1-210506169aaENSP00000478161.1
 
Protein coding
A0A087WTV4 -TSL:5CDS 5' and 3' incomplete
ENST00000531042.5CPSF1-205580148aaENSP00000435761.2
 
Nonsense mediated decay
E9PIM1 -TSL:5
ENST00000622776.1CPSF1-2141029No protein-
 
Retained intron
--TSL:5
ENST00000531480.2CPSF1-206789No protein-
 
Retained intron
--TSL:3
ENST00000532560.5CPSF1-208701No protein-
 
Retained intron
--TSL:3
ENST00000526271.2CPSF1-201697No protein-
 
Retained intron
--TSL:3
ENST00000527827.1CPSF1-202619No protein-
 
Retained intron
--TSL:2
ENST00000532725.1CPSF1-209597No protein-
 
Retained intron
--TSL:2
ENST00000529288.1CPSF1-204588No protein-
 
Retained intron
--TSL:2
ENST00000533492.1CPSF1-211510No protein-
 
Retained intron
--TSL:5
ENST00000527916.1CPSF1-203506No protein-
 
Retained intron
--TSL:5
Statistics

Exons: 38, Coding exons: 37, Transcript length: 4,480 bps, Translation length: 1,443 residues

MANE

This MANE Select transcript contains ENSP00000484669 and matches to NM_013291.3 and NP_037423.2

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q10570

CCDS

This transcript is a member of the Human CCDS set: CCDS34966

Transcript Support Level (TSL)

TSL:1

Version

ENST00000616140.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.