Transcript: ENST00000631149.3 SAG-232

Description

S-antigen visual arrestin [Source:HGNC Symbol;Acc:HGNC:10521]

Gene Synonyms

ARRESTIN, RP47

Location

Scaffold HG2232_PATCH: 253,154-292,393 forward strand.

About this transcript

This transcript has 16 exons, is annotated with 18 domains and features and maps to 538 oligo probes.

Gene

This transcript is a product of gene ENSG00000281857.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq Match	Flags
ENST00000631149.3	SAG-232	1596	405aa	ENSP00000486571.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P10523	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000628376.2	SAG-225	791	169aa	ENSP00000487232.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7ESX4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000625330.1	SAG-217	556	130aa	ENSP00000485836.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C9JSX4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000630167.2	SAG-229	556	35aa	ENSP00000486299.1	Nonsense mediated decay	F8WCN5	-	-
ENST00000629813.1	SAG-228	571	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined	-	-	-
ENST00000627261.1	SAG-221	485	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined	-	-	-
ENST00000627531.2	SAG-222	468	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined	-	-	-
ENST00000629091.1	SAG-226	322	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined	-	-	-
ENST00000626850.1	SAG-220	198	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined	-	-	-
ENST00000626072.2	SAG-218	6659	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000629158.2	SAG-227	4984	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000626611.2	SAG-219	3391	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000630486.2	SAG-230	2581	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000630815.2	SAG-231	567	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000628065.2	SAG-224	496	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000627591.1	SAG-223	482	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-

Summary

Statistics

Exons: 16, Coding exons: 15, Transcript length: 1,596 bps, Translation length: 405 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P10523

Version

ENST00000631149.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article. This was projected to the alternate locus via a mapping from the primary assembly.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000631149.3 SAG-232

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Transcript: ENST00000631149.3 SAG-232

Summary

About Us

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