Transcript: ENST00000641802.1 OR2C3-202

Description

olfactory receptor family 2 subfamily C member 3 [Source:HGNC Symbol;Acc:HGNC:15005]

Gene Synonyms

OR2C4, OR2C5P, OST742

Location

Chromosome 1: 247,524,677-247,536,440 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 26 domains and features, is associated with 5413 variant alleles and maps to 521 oligo probes.

Gene

This transcript is a product of gene ENSG00000196242.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000641802.1	OR2C3-202	8509	320aa	ENSP00000493385.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1634	Q8N628	NM_198074.6	The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select, A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENST00000366487.4	OR2C3-201	8467	320aa	ENSP00000355443.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1634	Q8N628	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENST00000673193.1	OR2C3-203	1912	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 1, Transcript length: 8,509 bps, Translation length: 320 residues

MANE

This MANE Select transcript contains ENSP00000493385 and matches to NM_198074.6 and NP_932340.4

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8N628

CCDS

This transcript is a member of the Human CCDS set: CCDS1634

Version

ENST00000641802.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000641802.1 OR2C3-202

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Transcript: ENST00000641802.1 OR2C3-202

Summary

About Us

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