Transcript: ENST00000686812.1 FOXO6-203

Description

forkhead box O6 [Source:HGNC Symbol;Acc:HGNC:24814]

Location

Chromosome 1: 41,366,679-41,382,681 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 18 domains and features, is associated with 6876 variant alleles and maps to 195 oligo probes.

Gene

This transcript is a product of gene ENSG00000204060.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq Match	Flags
ENST00000641094.2	FOXO6-202	1479	492aa	ENSP00000493184.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8MYZ6	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENST00000686812.1	FOXO6-203	1162	364aa	ENSP00000509631.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I5QKU9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000372591.1	FOXO6-201	2398	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined	-	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 1,162 bps, Translation length: 364 residues

Version

ENST00000686812.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Frameshift introns

Frameshift introns occur at intron number(s) 2.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000686812.1 FOXO6-203

Summary

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Transcript: ENST00000686812.1 FOXO6-203

Summary

About Us

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