|
Status |
Public on Mar 01, 2015 |
Title |
RNA-seq analysis of neonatal mouse cochlear hair cells |
Organism |
Mus musculus |
Experiment type |
Expression profiling by high throughput sequencing
|
Summary |
This study examined transcripts that are enriched in neonatal mouse cochlear hair cells. Hair cells were purified by FACS sorting for GFP fluorescence from the cochleas of transgenic mice in which the endogenous Atoh1 gene was fused with GFP
|
|
|
Overall design |
Two replicates of GFP+ hair cells were compared with all other cochlear cell types that were GFP-
|
|
|
Contributor(s) |
Groves AK |
Citation(s) |
25855195 |
NIH grant(s) |
Grant ID |
Grant title |
Affiliation |
Name |
R21 DC011657 |
Identifying the Atoh1 targetome in hair cells with deep sequencing |
BAYLOR COLLEGE OF MEDICINE |
GROVES |
R01 DC006185 |
Genetic Regulation of Cochlear Development: Characterization of Inner Ear Stem Cells |
BAYLOR COLLEGE OF MEDICINE |
GROVES |
|
Submission date |
Feb 04, 2015 |
Last update date |
May 15, 2019 |
Contact name |
Andrew Groves |
E-mail(s) |
akgroves@bcm.edu
|
Phone |
7137988743
|
Organization name |
Baylor College of Medicine
|
Department |
Molecular and Human Genetics
|
Street address |
1 Baylor Plaza
|
City |
Houston |
State/province |
TX |
ZIP/Postal code |
77030 |
Country |
USA |
|
|
Platforms (1) |
GPL13112 |
Illumina HiSeq 2000 (Mus musculus) |
|
Samples (4)
|
GSM1602228 |
Purified Atoh1-GFP+ cells from mouse cochlea_1 |
GSM1602229 |
Purified Atoh1-GFP+ cells from mouse cochlea_2 |
GSM1602230 |
Purified Atoh1-GFP- cells from mouse cochlea_1 |
GSM1602231 |
Purified Atoh1-GFP- cells from mouse cochlea_2 |
|
Relations |
BioProject |
PRJNA274564 |
SRA |
SRP053189 |