KEGG   COMPOUND: C00035
Entry
C00035                      Compound                               
Name
GDP;
Guanosine 5'-diphosphate;
Guanosine diphosphate
Formula
C10H15N5O11P2
Exact mass
443.0243
Mol weight
443.2005
Structure
Remark
Same as: G10620
Reaction
Pathway
map00230  Purine metabolism
map01100  Metabolic pathways
map01232  Nucleotide metabolism
map04014  Ras signaling pathway
map04015  Rap1 signaling pathway
map04137  Mitophagy - animal
map04140  Autophagy - animal
map04144  Endocytosis
Module
M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP
M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
Enzyme
1.17.4.1        2.4.1.29        2.4.1.32        2.4.1.33        
2.4.1.36        2.4.1.48        2.4.1.54        2.4.1.65        
2.4.1.69        2.4.1.83        2.4.1.110       2.4.1.132       
2.4.1.142       2.4.1.152       2.4.1.217       2.4.1.246       
2.4.1.251       2.4.1.252       2.4.1.269       2.4.1.270       
2.4.1.308       2.4.1.344       2.4.1.345       2.4.1.346       
2.4.1.348       2.4.1.349       2.4.1.353       2.4.1.361       
2.4.1.370       2.4.1.371       2.4.1.374       2.4.1.-         
2.5.1.135       2.7.1.40        2.7.1.48        2.7.1.81        
2.7.1.156       2.7.1.190       2.7.1.237       2.7.2.10        
2.7.4.6         2.7.4.8         2.7.4.34        2.7.7.8         
2.7.7.22        2.7.7.78        2.7.7.88        3.1.7.2         
3.2.1.42        3.6.1.5         3.6.1.6         3.6.1.42        
3.6.5.1         3.6.5.2         3.6.5.3         3.6.5.4         
3.6.5.5         3.6.5.6         4.1.1.32        6.2.1.4         
6.2.1.10        6.3.2.31        6.3.2.34        6.3.4.4
 » show all
Brite
Compounds with biological roles [BR:br08001]
 Nucleic acids
  Nucleotides
   Ribonucleotides
    C00035  GDP
Other DBs
CAS: 146-91-8
PubChem: 3337
ChEBI: 17552
PDB-CCD: GDP[PDBj]
3DMET: B01135
NIKKAJI: J40.056D
LinkDB
KCF data

ATOM        28
            1   N4y N    29.0166  -14.4798
            2   C8y C    30.0765  -15.2194
            3   C1y C    27.7235  -14.8990
            4   C8x C    29.4941  -13.0820
            5   C8y C    31.3170  -14.3109
            6   N5x N    30.2163  -16.6406
            7   O2x O    26.5879  -14.0431
            8   C1y C    27.2927  -16.1513
            9   N5x N    30.9443  -13.0878
            10  C8y C    32.5692  -14.8643
            11  C8y C    31.5385  -17.2288
            12  C1y C    25.4813  -14.8409
            13  C1y C    25.9123  -16.1513
            14  O1a O    28.1022  -17.2869
            15  N4x N    32.7324  -16.3551
            16  O5x O    33.6816  -14.0372
            17  N1a N    31.6898  -18.6150
            18  C1b C    24.1534  -14.4099
            19  O1a O    25.4639  -17.4734
            20  O2b O    23.1167  -15.3360
            21  P1b P    21.7248  -15.3360
            22  O2c O    20.3329  -15.3360
            23  O1c O    21.7190  -16.7338
            24  O1c O    21.7190  -13.9439
            25  P1b P    18.9408  -15.3301
            26  O1c O    18.9992  -16.7279
            27  O1c O    17.5430  -15.3301
            28  O1c O    18.9992  -13.9382
BOND        30
            1     1   2 1
            2     3   1 1 #Up
            3     1   4 1
            4     2   5 2
            5     2   6 1
            6     3   7 1
            7     3   8 1
            8     4   9 2
            9     5  10 1
            10    6  11 2
            11    7  12 1
            12    8  13 1
            13    8  14 1 #Down
            14   10  15 1
            15   10  16 2
            16   11  17 1
            17   12  18 1 #Up
            18   13  19 1 #Down
            19   18  20 1
            20   20  21 1
            21   21  22 1
            22   21  23 1
            23   21  24 2
            24   22  25 1
            25   25  26 1
            26   25  27 1
            27   25  28 2
            28    5   9 1
            29   11  15 1
            30   12  13 1

» Japanese version

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