KEGG   PATHWAY: dre00010
Entry
dre00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Danio rerio (zebrafish)
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
dre00010  Glycolysis / Gluconeogenesis
dre00010

Module
dre_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:dre00010]
dre_M00002  Glycolysis, core module involving three-carbon compounds [PATH:dre00010]
dre_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:dre00010]
dre_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:dre00010]
Other DBs
GO: 0006096 0006094
Organism
Danio rerio (zebrafish) [GN:dre]
Gene
406339  hk2; hexokinase-2 [KO:K00844] [EC:2.7.1.1]
406791  hk1; hexokinase-1 [KO:K00844] [EC:2.7.1.1]
321224  hkdc1; hexokinase HKDC1 [KO:K00844] [EC:2.7.1.1]
751668  gck; hexokinase-4 [KO:K12407] [EC:2.7.1.2]
246095  gpib; glucose-6-phosphate isomerase b [KO:K01810] [EC:5.3.1.9]
246094  gpia; glucose-6-phosphate isomerase a [KO:K01810] [EC:5.3.1.9]
561416  pfkpb; ATP-dependent 6-phosphofructokinase, platelet type isoform X1 [KO:K00850] [EC:2.7.1.11]
447836  pfkma; phosphofructokinase, muscle a [KO:K00850] [EC:2.7.1.11]
560944  pfkpa; ATP-dependent 6-phosphofructokinase, platelet type isoform X7 [KO:K00850] [EC:2.7.1.11]
570106  pfkla; ATP-dependent 6-phosphofructokinase, liver type [KO:K00850] [EC:2.7.1.11]
568001  pfkmb; phosphofructokinase, muscle b isoform 2 [KO:K00850] [EC:2.7.1.11]
550259  pfklb; phosphofructokinase, liver b [KO:K00850] [EC:2.7.1.11]
335231  fbp1a; fructose-1,6-bisphosphatase 1a [KO:K03841] [EC:3.1.3.11]
282672  fbp1b; fructose-1,6-bisphosphatase 1b [KO:K03841] [EC:3.1.3.11]
445505  fbp2; fructose-1,6-bisphosphatase isozyme 2 [KO:K03841] [EC:3.1.3.11]
321664  aldob; fructose-bisphosphate aldolase B [KO:K01623] [EC:4.1.2.13]
369193  aldocb; fructose-bisphosphate aldolase C-B [KO:K01623] [EC:4.1.2.13]
792692  aldoca; fructose-bisphosphate aldolase C-A [KO:K01623] [EC:4.1.2.13]
406496  aldoab; aldolase a, fructose-bisphosphate, b [KO:K01623] [EC:4.1.2.13]
336425  aldoaa; aldolase a, fructose-bisphosphate, a [KO:K01623] [EC:4.1.2.13]
192309  tpi1a; triosephosphate isomerase A [KO:K01803] [EC:5.3.1.1]
560753  tpi1b; triosephosphate isomerase B [KO:K01803] [EC:5.3.1.1]
317743  gapdh; glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
406367  gapdhs; glyceraldehyde-3-phosphate dehydrogenase 2 [KO:K10705] [EC:1.2.1.12]
406696  pgk1; phosphoglycerate kinase 1 [KO:K00927] [EC:2.7.2.3]
572733  pgam2; phosphoglycerate mutase 2 [KO:K01834] [EC:5.4.2.11]
323107  pgam1a; phosphoglycerate mutase 1a [KO:K01834] [EC:5.4.2.11]
327165  pgam1b; phosphoglycerate mutase 1b [KO:K01834] [EC:5.4.2.11]
402874  eno2; gamma-enolase [KO:K01689] [EC:4.2.1.11]
378963  eno3; beta-enolase [KO:K01689] [EC:4.2.1.11]
393668  eno1b; enolase 1b, (alpha) [KO:K01689] [EC:4.2.1.11]
334116  eno1a; enolase 1a, (alpha) [KO:K01689] [EC:4.2.1.11]
558487  eno4; enolase 4 [KO:K27394] [EC:4.2.1.11]
335817  pkma; pyruvate kinase PKM [KO:K00873] [EC:2.7.1.40]
445094  pkmb; pyruvate kinase M1/2b [KO:K00873] [EC:2.7.1.40]
114551  pklr; pyruvate kinase PKLR [KO:K00873] [EC:2.7.1.40]
436672  pdha1b; pyruvate dehydrogenase E1 subunit alpha 1b [KO:K00161] [EC:1.2.4.1]
406702  pdha1a; pyruvate dehydrogenase E1 subunit alpha 1a [KO:K00161] [EC:1.2.4.1]
406428  pdhb; pyruvate dehydrogenase E1 component subunit beta, mitochondrial [KO:K00162] [EC:1.2.4.1]
324201  dlat; dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial [KO:K00627] [EC:2.3.1.12]
399479  dldh; dihydrolipoyl dehydrogenase, mitochondrial [KO:K00382] [EC:1.8.1.4]
30496  ldha; L-lactate dehydrogenase A chain [KO:K00016] [EC:1.1.1.27]
436747  ldhbb; L-lactate dehydrogenase B-B chain [KO:K00016] [EC:1.1.1.27]
30497  ldhba; L-lactate dehydrogenase B-A chain [KO:K00016] [EC:1.1.1.27]
116517  adh5; alcohol dehydrogenase class-3 [KO:K00121] [EC:1.1.1.284 1.1.1.1]
322482  adh8a; alcohol dehydrogenase 8a [KO:K00121] [EC:1.1.1.284 1.1.1.1]
393427  adh5l; Alcohol dehydrogenase class-3-like [KO:K00121] [EC:1.1.1.284 1.1.1.1]
402841  adh8b; alcohol dehydrogenase 8b [KO:K00121] [EC:1.1.1.284 1.1.1.1]
402939  zgc:77938; Alcohol dehydrogenase class-3-like [KO:K00121] [EC:1.1.1.284 1.1.1.1]
799805  akr1a1b; aldo-keto reductase family 1 member A1-B [KO:K00002] [EC:1.1.1.2]
445326  akr1a1a; aldo-keto reductase family 1 member A1-A [KO:K00002] [EC:1.1.1.2]
323653  aldh3a2a; aldehyde dehydrogenase family 3 member A2a [KO:K00128] [EC:1.2.1.3]
393462  aldh2.1; aldehyde dehydrogenase 2 family member, tandem duplicate 1 [KO:K00128] [EC:1.2.1.3]
368239  aldh2.2; aldehyde dehydrogenase 2 family member, tandem duplicate 2 [KO:K00128] [EC:1.2.1.3]
100000026  aldh3a1; fatty aldehyde dehydrogenase isoform X2 [KO:K00128] [EC:1.2.1.3]
492710  aldh16a1; aldehyde dehydrogenase family 16 member A1 [KO:K00128] [EC:1.2.1.3]
447920  aldh3a2b; aldehyde dehydrogenase family 3 member A2b [KO:K00128] [EC:1.2.1.3]
100536795  wu:fb14d09; aldehyde dehydrogenase, mitochondrial [KO:K00128] [EC:1.2.1.3]
334197  aldh7a1; alpha-aminoadipic semialdehyde dehydrogenase [KO:K14085] [EC:1.2.1.31 1.2.1.8 1.2.1.3]
100005587  aldh9a1a.1; 4-trimethylaminobutyraldehyde dehydrogenase A [KO:K00149] [EC:1.2.1.47 1.2.1.3]
399481  aldh9a1b; 4-trimethylaminobutyraldehyde dehydrogenase B [KO:K00149] [EC:1.2.1.47 1.2.1.3]
100006238  aldh9a1a.2; aldehyde dehydrogenase 9 family, member A1a, tandem duplicate 2 [KO:K00149] [EC:1.2.1.47 1.2.1.3]
282559  aldh3b1; aldehyde dehydrogenase family 3 member B1 [KO:K00129] [EC:1.2.1.5]
557008  aldh3b2; aldehyde dehydrogenase family 3 member B1 [KO:K00129] [EC:1.2.1.5]
436914  acss2; acetyl-coenzyme A synthetase, cytoplasmic [KO:K01895] [EC:6.2.1.1]
541435  acss1; acetyl-coenzyme A synthetase 2-like, mitochondrial [KO:K01895] [EC:6.2.1.1]
560020  acss2l; acyl-CoA synthetase short chain family member 2 like [KO:K01895] [EC:6.2.1.1]
436646  galm; aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
394000  pgm1; phosphoglucomutase-1 [KO:K01835] [EC:5.4.2.2]
405822  pgm2; phosphoglucomutase-2 [KO:K15779] [EC:5.4.2.2 5.4.2.7]
563180  g6pc1a.2; glucose-6-phosphatase catalytic subunit 1 [KO:K01084] [EC:3.1.3.9]
100000750  g6pc1b; Glucose-6-phosphatase b [KO:K01084] [EC:3.1.3.9]
445118  g6pc1a.1; glucose-6-phosphatase a, catalytic subunit, tandem duplicate 1 isoform 1 [KO:K01084] [EC:3.1.3.9]
790919  g6pc3; glucose-6-phosphatase 3 [KO:K01084] [EC:3.1.3.9]
557919  adpgk; ADP-dependent glucokinase precursor [KO:K08074] [EC:2.7.1.147]
566398  adpgk2; ADP-dependent glucokinase [KO:K08074] [EC:2.7.1.147]
436903  bpgm; bisphosphoglycerate mutase [KO:K01837] [EC:5.4.2.4 5.4.2.11]
394075  minpp1b; multiple inositol polyphosphate phosphatase 1b precursor [KO:K03103] [EC:3.1.3.62 3.1.3.80]
561891  minpp1a; multiple inositol polyphosphate phosphatase 1a [KO:K03103] [EC:3.1.3.62 3.1.3.80]
378727  pck1; phosphoenolpyruvate carboxykinase, cytosolic [GTP] [KO:K01596] [EC:4.1.1.32]
406473  pck2; phosphoenolpyruvate carboxykinase [GTP], mitochondrial [KO:K01596] [EC:4.1.1.32]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
dre00020  Citrate cycle (TCA cycle)
dre00030  Pentose phosphate pathway
dre00500  Starch and sucrose metabolism
dre00620  Pyruvate metabolism
dre00640  Propanoate metabolism
KO pathway
ko00010   
LinkDB

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