KEGG   PATHWAY: rn00240
Entry
rn00240                     Pathway                                
Name
Pyrimidine metabolism
Class
Metabolism; Nucleotide metabolism
Pathway map
rn00240  Pyrimidine metabolism
rn00240

Module
M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:rn00240]
M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:rn00240]
M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:rn00240]
M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:rn00240]
M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:rn00240]
M00939  Pyrimidine degradation, uracil => 3-hydroxypropanoate [PATH:rn00240]
M00968  Pentose bisphosphate pathway (nucleoside degradation), archaea, nucleoside/NMP => 3-PGA/glycerone phosphate [PATH:rn00240]
Other DBs
GO: 0006220 0006213
Reaction
R00139  ATP:2'-deoxy-5-hydroxymethylcytidine-5'-diphosphate phosphotransferase
R00140  ATP:5-hydroxymethyldeoxycytidylate phosphotransferase
R00155  UDP phosphohydrolase
R00156  ATP:UDP phosphotransferase
R00158  ATP:UMP phosphotransferase
R00159  UTP phosphohydrolase
R00510  cytidine-5'-monophosphate phosphoribohydrolase
R00511  cytidine-5'-monophosphate phosphohydrolase
R00512  ATP:CMP phosphotransferase
R00513  ATP:cytidine 5'-phosphotransferase
R00514  CDP phosphohydrolase
R00515  CTP diphosphohydrolase (diphosphate-forming)
R00517  GTP:cytidine 5'-phosphotransferase
R00569  CTP phosphohydrolase
R00570  ATP:CDP phosphotransferase
R00571  UTP:ammonia ligase (ADP-forming)
R00573  UTP:L-glutamine amido-ligase (ADP-forming)
R00575  HCO3-:L-glutamine amido-ligase (ADP-forming, carbamate-phosphorylating)
R00662  uridine triphosphate pyrophosphohydrolase
R00905  3-ureidopropanoate amidohydrolase
R00963  uridine 5'-monophosphate phosphohydrolase
R00964  ATP:uridine 5'-phosphotransferase
R00965  orotidine-5'-phosphate carboxy-lyase (UMP-forming)
R00966  UMP:diphosphate phospho-alpha-D-ribosyltransferase
R00968  GTP:uridine 5'-phosphotransferase
R00969  P1,P4-bis(5'-uridyl)-tetraphosphate uridylohydrolase
R00974  cytosine aminohydrolase
R00976  uracil:acceptor oxidoreductase
R00977  5,6-dihydrouracil:NAD+ oxidoreductase
R00978  5,6-dihydrouracil:NADP+ oxidoreductase
R01055  uracil hydro-lyase (adding D-ribose 5-phosphate;pseudouridine-5'-phosphate-forming)
R01080  uridine ribohydrolase
R01397  carbamoyl-phosphate:L-aspartate carbamoyltransferase
R01411  5-methylcytosine aminohydrolase
R01413  thymine:acceptor oxidoreductase
R01415  5,6-dihydrothymine:NADP+ oxidoreductase
R01567  ATP:thymidine 5'-phosphotransferase
R01569  thymidylate 5'-phosphohydrolase
R01570  thymidine:phosphate deoxy-alpha-D-ribosyltransferase
R01663  dCMP aminohydrolase
R01664  2'-deoxycytidine 5'-monophosphate phosphohydrolase
R01665  ATP:dCMP phosphotransferase
R01666  ATP:deoxycitidine 5'-phosphotransferase
R01668  dCTP nucleotidohydrolase
R01669  5,10-methylenetetrahydrofolate:deoxycytidylate 5-hydroxymethyltransferase
R01867  (S)-dihydroorotate:fumarate oxidoreductase
R01868  (S)-dihydroorotate:quinone oxidoreductase
R01869  (S)-dihydroorotate:NAD+ oxidoreductase
R01870  orotidine-5'-phosphate:diphosphate phospho-alpha-D-ribosyl-transferase
R01876  uridine:phosphate alpha-D-ribosyltransferase
R01877  uridine 3'-monophosphate phosphohydrolase
R01878  cytidine aminohydrolase
R01993  (S)-dihydroorotate amidohydrolase
R02018  2'-deoxyuridine 5'-diphosphate:oxidized-thioredoxin 2'-oxidoreductase
R02022  2'-deoxyuridine 5'-triphosphate:oxydized-thioredoxin 2'-oxidoreductase
R02023  2'-deoxyuridine 5'-triphosphate:oxydized-thioredoxin 2'-oxidoreductase
R02024  2'-deoxycytidine diphosphate:oxidized-thioredoxin 2'-oxidoreductase
R02092  dTDP phosphohydrolase
R02093  ATP:dTDP phosphotransferase
R02094  ATP:dTMP phosphotransferase
R02095  dTTP nucleotidohydrolase
R02098  ATP:dUMP phosphotransferase
R02099  ATP:deoxyuridine 5'-phosphotransferase
R02100  dUTP nucleotidohydrolase
R02101  5,10-methylenetetrahydrofolate:dUMP C-methyltransferase
R02102  2'-deoxyuridine 5'-monophosphate phosphohydrolase
R02137  cytidine ribohydrolase
R02139  barbiturate amidohydrolase (3-oxo-3-ureidopropanoate-forming)
R02269  5,6-dihydrouracil amidohydrolase
R02296  cytidine:orthophosphate alpha-D-ribosyltransferase
R02325  dCTP aminohydrolase
R02326  ATP:dCDP phosphotransferase
R02330  dUTP nucleotidohydrolase
R02331  ATP:dUDP phosphotransferase
R02370  cytidine 3'-phosphate phosphohydrolase
R02484  deoxyuridine:orthophosphate 2-deoxy-D-ribosyltransferase
R02485  deoxycytidine aminohydrolase
R03055  (R)-5,6-dihydrothymine amidohydrolase
R03315  ATP:pseudouridine 5'-phosphotransferase
R03538  2',3'-cyclic UMP 3'-nucleotidohydrolase
R03929  2',3'-cyclic CMP 3'-nucleotidohydrolase
R04666  (R)-3-ureidoisobutyrate amidohydrolase
R06613  5,10-methylenetetrahydrofolate,NADPH:dUMP C-methyltransferase
R07307  dCTP aminohydrolase (dUMP-forming)
R07629  3-oxo-3-ureidopropanoate amidohydrolase (urea- and malonate-forming)
R09289  3-hydroxypropionate:NADP+ oxidoreductase
R09936  uracil,FMNH2:oxygen oxidoreductase (uracil hydroxylating, ring-opening)
R09947  (Z)-3-ureidoacrylate-peracid amidohydrolase
R09980  ureidoacrylate amidohydrolase
R09981   
R09982   
R09983   
R10777  5-methylbarbiturate amidohydrolase (2-methyl-3-oxo-3-ureidopropanoate-forming)
R10778  2-methyl-3-oxo-3-ureidopropanoate amidohydrolase (urea- and methylmalonate-forming)
R10837  CMP:phosphate (5-phospho-alpha-D-ribosyl)transferase
R10838  UMP:phosphate (5-phospho-alpha-D-ribosyl)transferase
R11026  (R)-5,6-dihydrothymine:NAD+ oxidoreductase
R11323  dTTP diphosphohydrolase
R11635  UTP:formate 2'-oxidoreductase
R11636  CTP:formate 2'-oxidoreductase
R12955  uridine 5'-monophosphate phosphoribohydrolase
R12956  thymidine 5'-monophosphate phosphodeoxyribohydrolase
Compound
C00015  UDP
C00039  DNA
C00046  RNA
C00055  CMP
C00063  CTP
C00064  L-Glutamine
C00075  UTP
C00086  Urea
C00099  beta-Alanine
C00105  UMP
C00106  Uracil
C00112  CDP
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00169  Carbamoyl phosphate
C00178  Thymine
C00214  Thymidine
C00222  3-Oxopropanoate
C00239  dCMP
C00295  Orotate
C00299  Uridine
C00337  (S)-Dihydroorotate
C00363  dTDP
C00364  dTMP
C00365  dUMP
C00380  Cytosine
C00383  Malonate
C00429  5,6-Dihydrouracil
C00438  N-Carbamoyl-L-aspartate
C00458  dCTP
C00459  dTTP
C00460  dUTP
C00475  Cytidine
C00526  Deoxyuridine
C00672  2-Deoxy-D-ribose 1-phosphate
C00705  dCDP
C00813  Barbiturate
C00881  Deoxycytidine
C01013  3-Hydroxypropanoate
C01103  Orotidine 5'-phosphate
C01168  Pseudouridine 5'-phosphate
C01205  (R)-3-Amino-2-methylpropanoate
C01346  dUDP
C01368  3'-UMP
C01563  Carbamate
C02067  Pseudouridine
C02170  Methylmalonate
C02354  2',3'-Cyclic CMP
C02355  2',3'-Cyclic UMP
C02376  5-Methylcytosine
C02642  3-Ureidopropionate
C03997  5-Hydroxymethyldeoxycytidylate
C05281  5-Methylbarbiturate
C05822  3'-CMP
C06198  P1,P4-Bis(5'-uridyl) tetraphosphate
C11038  2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039  2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607  3-Oxo-3-ureidopropanoate
C20231  (Z)-3-Ureidoacrylate peracid
C20249  (Z)-3-Peroxyaminoacrylate
C20253  Aminoacrylate
C20254  Ureidoacrylate
C20846  3-Oxo-3-ureidoisobutyrate
C21028  (R)-5,6-Dihydrothymine
C21029  (R)-3-Ureidoisobutyrate
Related
pathway
rn00030  Pentose phosphate pathway
rn00220  Arginine biosynthesis
rn00250  Alanine, aspartate and glutamate metabolism
rn00280  Valine, leucine and isoleucine degradation
rn00410  beta-Alanine metabolism
KO pathway
ko00240   
LinkDB

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