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Ctps1 CTP synthase 1 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100689101, updated on 8-Mar-2024

Summary

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Gene symbol
Ctps1
Gene description
CTP synthase 1
See related
Ensembl:ENSCGRG00015003199
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Also known as
Ctps
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
19
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613862.1 (631169..661981)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 2 NC_048595.1 (31575291..31618287)

NW_003613862.1Genomic Context describing neighboring genes Neighboring gene nuclear transcription factor Y subunit gamma Neighboring gene microRNA mir-30c-1 Neighboring gene potassium voltage-gated channel subfamily Q member 4 Neighboring gene myosin light polypeptide 6-like Neighboring gene schlafen like 1 Neighboring gene Scm polycomb group protein homolog 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. [Cloning and sequencing of CTP synthetase cDNA from Chinese hamster cells]. Zhai C, et al. Hua Xi Yi Ke Da Xue Xue Bao, 1995 Mar. PMID 7657337
  2. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables CTP synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables identical protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in CTP biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in pyrimidine nucleobase biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoophidium IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CTP synthase 1
Names
CTP synthetase 1
UTP--ammonia ligase 1
cytidine 5'-triphosphate synthase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613862.1 Reference CriGri_1.0 Primary Assembly

    Range
    631169..661981
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007642470.4 → XP_007640660.1  CTP synthase 1 isoform X1

    See identical proteins and their annotated locations for XP_007640660.1

    UniProtKB/TrEMBL
    G3HCN2
    Conserved Domains (3) summary
    cd01746
    Location:299 → 544
    GATase1_CTP_Synthase; Type 1 glutamine amidotransferase (GATase1) domain found in Cytidine Triphosphate Synthetase
    PLN02327
    Location:1 → 556
    PLN02327; CTP synthase
    pfam06418
    Location:2 → 272
    CTP_synth_N; CTP synthase N-terminus

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048595.1 Alternate CriGri-PICRH-1.0

    Range
    31575291..31618287
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027399142.2 → XP_027254943.1  CTP synthase 1 isoform X1

    UniProtKB/TrEMBL
    G3HCN2

  2. XM_027399144.2 → XP_027254945.1  CTP synthase 1 isoform X1

    UniProtKB/TrEMBL
    G3HCN2

  3. XM_027399143.2 → XP_027254944.1  CTP synthase 1 isoform X1

    UniProtKB/TrEMBL
    G3HCN2

  4. XM_027399139.1 → XP_027254940.1  CTP synthase 1 isoform X1

    UniProtKB/TrEMBL
    G3HCN2

  5. XM_027399141.2 → XP_027254942.1  CTP synthase 1 isoform X1

    UniProtKB/TrEMBL
    G3HCN2
    Related
    ENSCGRP00015004141.1, ENSCGRT00015005121.2

  6. XM_027399145.2 → XP_027254946.1  CTP synthase 1 isoform X2

    UniProtKB/TrEMBL
    A0A9J7F9Z8
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P50547.1 GenPept UniProtKB/Swiss-Prot:P50547

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