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Slc7a1 solute carrier family 7 member 1 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100689176, updated on 8-Mar-2024

Summary

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Gene symbol
Slc7a1
Gene description
solute carrier family 7 member 1
See related
Ensembl:ENSCGRG00015017255
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
15
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613630.1 (1533088..1607967)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 4 NC_048597.1 (84176465..84251442, complement)

NW_003613630.1Genomic Context describing neighboring genes Neighboring gene ubiquitin like 3 Neighboring gene uncharacterized LOC118237778 Neighboring gene microtubule associated scaffold protein 2 Neighboring gene 60S ribosomal protein L27a Neighboring gene dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables amino acid transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in amino acid transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
high affinity cationic amino acid transporter 1
Names
High affinity cationic amino acid transporter 1
cationic amino acid transporter-1
solute carrier family 7 (cationic amino acid transporter, y+ system), member 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613630.1 Reference CriGri_1.0 Primary Assembly

    Range
    1533088..1607967
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007652065.4 → XP_007650255.1  high affinity cationic amino acid transporter 1

    See identical proteins and their annotated locations for XP_007650255.1

    UniProtKB/TrEMBL
    A0A8C2QLB8, G3GWG7
    Conserved Domains (1) summary
    TIGR00906
    Location:4 → 609
    2A0303; cationic amino acid transport permease

  2. XM_007652068.4 → XP_007650258.1  high affinity cationic amino acid transporter 1

    See identical proteins and their annotated locations for XP_007650258.1

    UniProtKB/TrEMBL
    A0A8C2QLB8, G3GWG7
    Conserved Domains (1) summary
    TIGR00906
    Location:4 → 609
    2A0303; cationic amino acid transport permease

  3. XM_007652071.4 → XP_007650261.1  high affinity cationic amino acid transporter 1

    See identical proteins and their annotated locations for XP_007650261.1

    UniProtKB/TrEMBL
    A0A8C2QLB8, G3GWG7
    Conserved Domains (1) summary
    TIGR00906
    Location:4 → 609
    2A0303; cationic amino acid transport permease

  4. XM_003496651.5 → XP_003496699.1  high affinity cationic amino acid transporter 1

    See identical proteins and their annotated locations for XP_003496699.1

    UniProtKB/TrEMBL
    A0A8C2QLB8, G3GWG7
    Conserved Domains (1) summary
    TIGR00906
    Location:4 → 609
    2A0303; cationic amino acid transport permease

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048597.1 Alternate CriGri-PICRH-1.0

    Range
    84176465..84251442 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027413708.2 → XP_027269509.1  high affinity cationic amino acid transporter 1

    UniProtKB/TrEMBL
    A0A8C2QLB8, G3GWG7

  2. XM_027413709.2 → XP_027269510.1  high affinity cationic amino acid transporter 1

    UniProtKB/TrEMBL
    A0A8C2QLB8, G3GWG7
    Related
    ENSCGRP00015022707.2, ENSCGRT00015027854.2

  3. XM_027413706.2 → XP_027269507.1  high affinity cationic amino acid transporter 1

    UniProtKB/TrEMBL
    A0A8C2QLB8, G3GWG7
    Related
    ENSCGRP00015038759.1, ENSCGRT00015052923.1

  4. XM_027413707.2 → XP_027269508.1  high affinity cationic amino acid transporter 1

    UniProtKB/TrEMBL
    A0A8C2QLB8, G3GWG7
    Related
    ENSCGRP00015022681.1, ENSCGRT00015027821.2
Nucleotide Protein Strain
Heading Accession and Version

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