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St3gal4 ST3 beta-galactoside alpha-2,3-sialyltransferase 4 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100689440, updated on 8-Mar-2024

Summary

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Gene symbol
St3gal4
Gene description
ST3 beta-galactoside alpha-2,3-sialyltransferase 4
See related
Ensembl:ENSCGRG00015007988
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
11
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613908.1 (1021407..1065060, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 4 NC_048597.1 (147402772..147409604, complement)

NW_003613908.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L21-like Neighboring gene kirre like nephrin family adhesion molecule 3 Neighboring gene decapping enzyme, scavenger Neighboring gene TIR domain containing adaptor protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene-expression profiles for five key glycosylation genes for galactose-fed CHO cells expressing recombinant IL-4/13 cytokine trap. Clark KJ, et al. Biotechnol Bioeng, 2005 Jun 5. PMID 15818560
  2. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4
Names
CMP-N-acetylneuraminate-beta-galactosamide-alpha-2, 3-sialyltransferase
Gal beta-1,3/4-GlcNAc alpha-2,3-sialyltransferase St3Gal IV
NP_001233628.1
XP_007641504.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001246699.1 → NP_001233628.1  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4

    See identical proteins and their annotated locations for NP_001233628.1

    Status: PROVISIONAL

    Source sequence(s)
    AY266675
    UniProtKB/TrEMBL
    Q80WL0
    Related
    ENSCGRP00015010351.1, ENSCGRT00015012725.2
    Conserved Domains (1) summary
    pfam00777
    Location:88 → 332
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613908.1 Reference CriGri_1.0 Primary Assembly

    Range
    1021407..1065060 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007643314.4 → XP_007641504.1  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4 isoform X1

    See identical proteins and their annotated locations for XP_007641504.1

    UniProtKB/TrEMBL
    G3HFJ0
    Conserved Domains (1) summary
    pfam00777
    Location:110 → 357
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048597.1 Alternate CriGri-PICRH-1.0

    Range
    147402772..147409604 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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