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Crot carnitine O-octanoyltransferase [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100750995, updated on 8-Mar-2024

Summary

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Gene symbol
Crot
Gene description
carnitine O-octanoyltransferase
Locus tag
I79_013607
See related
Ensembl:ENSCGRG00015000201
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
18
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614224.1 (905769..937324, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 1 Unlocalized Scaffold NW_023276806.1 (187541141..187573513, complement)

NW_003614224.1Genomic Context describing neighboring genes Neighboring gene ATP-binding cassette, sub-family B (MDR/TAP), member 1B Neighboring gene ATP-binding cassette, sub-family B (MDR/TAP), member 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables carnitine O-octanoyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
peroxisomal carnitine O-octanoyltransferase
Names
Peroxisomal carnitine O-octanoyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614224.1 Reference CriGri_1.0 Primary Assembly

    Range
    905769..937324 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035458278.1 → XP_035314169.1  peroxisomal carnitine O-octanoyltransferase isoform X3

    UniProtKB/TrEMBL
    A0A061INH4, A0A8C2MXQ5
    Conserved Domains (1) summary
    pfam00755
    Location:20 → 603
    Carn_acyltransf; Choline/Carnitine o-acyltransferase

  2. XM_035458277.1 → XP_035314168.1  peroxisomal carnitine O-octanoyltransferase isoform X2

    UniProtKB/TrEMBL
    A0A061ILJ9, A0A9J7F535
    Conserved Domains (1) summary
    pfam00755
    Location:20 → 610
    Carn_acyltransf; Choline/Carnitine o-acyltransferase

  3. XM_035458276.1 → XP_035314167.1  peroxisomal carnitine O-octanoyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A061IKE6, A0A9J7F427
    Conserved Domains (1) summary
    pfam00755
    Location:20 → 638
    Carn_acyltransf; Choline/Carnitine o-acyltransferase

Alternate CriGri-PICRH-1.0

Genomic

  1. NW_023276806.1 Alternate CriGri-PICRH-1.0

    Range
    187541141..187573513 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027391540.2 → XP_027247341.1  peroxisomal carnitine O-octanoyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A061IKE6, A0A9J7F427
    Related
    ENSCGRP00015000174.2, ENSCGRT00015000246.2
    Conserved Domains (1) summary
    pfam00755
    Location:20 → 638
    Carn_acyltransf; Choline/Carnitine o-acyltransferase

  2. XM_027391542.2 → XP_027247343.1  peroxisomal carnitine O-octanoyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A061IKE6, A0A9J7F427
    Conserved Domains (1) summary
    pfam00755
    Location:20 → 638
    Carn_acyltransf; Choline/Carnitine o-acyltransferase

  3. XM_027391544.2 → XP_027247345.1  peroxisomal carnitine O-octanoyltransferase isoform X3

    UniProtKB/TrEMBL
    A0A061INH4, A0A8C2MXQ5
    Related
    ENSCGRP00015000186.2, ENSCGRT00015000259.2
    Conserved Domains (1) summary
    pfam00755
    Location:20 → 603
    Carn_acyltransf; Choline/Carnitine o-acyltransferase

  4. XM_027391543.2 → XP_027247344.1  peroxisomal carnitine O-octanoyltransferase isoform X2

    UniProtKB/TrEMBL
    A0A061ILJ9, A0A9J7F535
    Conserved Domains (1) summary
    pfam00755
    Location:20 → 610
    Carn_acyltransf; Choline/Carnitine o-acyltransferase
Nucleotide Protein Strain
Heading Accession and Version

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