U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Pign phosphatidylinositol glycan anchor biosynthesis class N [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100751357, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
Pign
Gene description
phosphatidylinositol glycan anchor biosynthesis class N
Locus tag
I79_008426
See related
Ensembl:ENSCGRG00015018853
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See Pign in Genome Data Viewer
Location:
chromosome: 5
Exon count:
31
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613867.1 (1597622..1734394)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 5 NC_048598.1 (76588413..76725570, complement)

NW_003613867.1Genomic Context describing neighboring genes Neighboring gene TNF receptor superfamily member 11a Neighboring gene RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannose-ethanolamine phosphotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
GPI ethanolamine phosphate transferase 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613867.1 Reference CriGri_1.0 Primary Assembly

    Range
    1597622..1734394
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007642590.4 → XP_007640780.1  GPI ethanolamine phosphate transferase 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C2M3L2, A0A9J7G1H7
    Conserved Domains (3) summary
    COG1524
    Location:7 → 280
    Npp1; Predicted pyrophosphatase or phosphodiesterase, AlkP superfamily [General function prediction only]
    pfam04987
    Location:431 → 884
    PigN; Phosphatidylinositolglycan class N (PIG-N)
    cd16020
    Location:40 → 345
    GPI_EPT_1; GPI ethanolamine phosphate transferase 1; PIG-N

  2. XM_003501966.5 → XP_003502014.1  GPI ethanolamine phosphate transferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C2M2G6, A0A8C2M3L2
    Conserved Domains (3) summary
    COG1524
    Location:7 → 280
    Npp1; Predicted pyrophosphatase or phosphodiesterase, AlkP superfamily [General function prediction only]
    pfam04987
    Location:431 → 884
    PigN; Phosphatidylinositolglycan class N (PIG-N)
    cd16020
    Location:40 → 345
    GPI_EPT_1; GPI ethanolamine phosphate transferase 1; PIG-N

RNA

  1. XR_003489591.2 RNA Sequence

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048598.1 Alternate CriGri-PICRH-1.0

    Range
    76588413..76725570 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027417857.2 → XP_027273658.1  GPI ethanolamine phosphate transferase 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C2M3L2, A0A9J7G1H7
    Related
    ENSCGRP00015024990.2, ENSCGRT00015030635.2

  2. XM_027417856.2 → XP_027273657.1  GPI ethanolamine phosphate transferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C2M2G6, A0A8C2M3L2
    Related
    ENSCGRP00015048097.1, ENSCGRT00015055556.1

RNA

  1. XR_003485762.2 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.