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Csad cysteine sulfinic acid decarboxylase [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100751520, updated on 8-Mar-2024

Summary

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Gene symbol
Csad
Gene description
cysteine sulfinic acid decarboxylase
Locus tag
I79_014836
See related
Ensembl:ENSCGRG00015028643
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
10
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614339.1 (835541..850054)
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003617247.1 (3728..6964)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 2 NC_048595.1 (398566642..398589902, complement)

NW_003617247.1Genomic Context describing neighboring genes Neighboring gene sterol O-acyltransferase 2 Neighboring gene insulin like growth factor binding protein 6

NW_003614339.1Genomic Context describing neighboring genes Neighboring gene integrin subunit beta 7 Neighboring gene zinc finger protein 740

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sulfinoalanine decarboxylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carboxylic acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cysteine sulfinic acid decarboxylase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614339.1 Reference CriGri_1.0 Primary Assembly

    Range
    835541..850054
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027439868.2 → XP_027295669.1  cysteine sulfinic acid decarboxylase isoform X2

    UniProtKB/TrEMBL
    G3HV59
    Conserved Domains (1) summary
    cl18945
    Location:49 → 228
    AAT_I; Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the ...

  2. XM_027439867.2 → XP_027295668.1  cysteine sulfinic acid decarboxylase isoform X2

    UniProtKB/TrEMBL
    G3HV59
    Conserved Domains (1) summary
    cl18945
    Location:49 → 228
    AAT_I; Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the ...

  3. XM_035458971.1 → XP_035314862.1  cysteine sulfinic acid decarboxylase isoform X2

    UniProtKB/TrEMBL
    G3HV59
    Conserved Domains (1) summary
    cl18945
    Location:49 → 228
    AAT_I; Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the ...

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003617247.1 Reference CriGri_1.0 Primary Assembly

    Range
    3728..6964
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003515024.5 → XP_003515072.3  cysteine sulfinic acid decarboxylase isoform X1

    UniProtKB/TrEMBL
    A0A8C2M516
    Conserved Domains (1) summary
    cd06450
    Location:89 → 489
    DOPA_deC_like; DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and ...

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048595.1 Alternate CriGri-PICRH-1.0

    Range
    398566642..398589902 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027396668.2 → XP_027252469.1  cysteine sulfinic acid decarboxylase isoform X3

    UniProtKB/TrEMBL
    A0A8C2M516
    Related
    ENSCGRP00015048698.1, ENSCGRT00015076017.1
    Conserved Domains (1) summary
    cd06450
    Location:89 → 489
    DOPA_deC_like; DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and ...

  2. XM_027396671.2 → XP_027252472.1  cysteine sulfinic acid decarboxylase isoform X3

    UniProtKB/TrEMBL
    A0A8C2M516
    Related
    ENSCGRP00015048614.1, ENSCGRT00015078760.1
    Conserved Domains (1) summary
    cd06450
    Location:89 → 489
    DOPA_deC_like; DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and ...

  3. XM_027396667.2 → XP_027252468.1  cysteine sulfinic acid decarboxylase isoform X3

    UniProtKB/TrEMBL
    A0A8C2M516
    Related
    ENSCGRP00015038328.2, ENSCGRT00015046657.2
    Conserved Domains (1) summary
    cd06450
    Location:89 → 489
    DOPA_deC_like; DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and ...

  4. XM_027396669.2 → XP_027252470.1  cysteine sulfinic acid decarboxylase isoform X4

    UniProtKB/TrEMBL
    A0A9J7F9P9
    Related
    ENSCGRP00015058318.1, ENSCGRT00015072565.1
Nucleotide Protein Strain
Heading Accession and Version

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