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LOC100751727 DNA (cytosine-5)-methyltransferase 3B [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100751727, updated on 11-Apr-2024

Summary

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Gene symbol
LOC100751727
Gene description
DNA (cytosine-5)-methyltransferase 3B
Locus tag
I79_008866
See related
Ensembl:ENSCGRG00015001739
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Also known as
Dnmt3b
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Genomic context

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Location:
chromosome: 6
Exon count:
23
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613890.1 (360942..385451, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 6 NC_048599.1 (26318464..26343210, complement)

NW_003613890.1Genomic Context describing neighboring genes Neighboring gene DNA (cytosine-5)-methyltransferase 3C-like Neighboring gene U1 spliceosomal RNA Neighboring gene 60S ribosomal protein L13a-like Neighboring gene COMM domain containing 7 Neighboring gene nucleolar protein 4 like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA (cytosine-5-)-methyltransferase activity, acting on CpG substrates IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA (cytosine-5)-methyltransferase 3B
Names
DNA methyltransferase 3B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613890.1 Reference CriGri_1.0 Primary Assembly

    Range
    360942..385451 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035455778.1 → XP_035311669.1  DNA (cytosine-5)-methyltransferase 3B isoform X6

    UniProtKB/TrEMBL
    A0A8C2LXU8, A0A8C2M3G4
    Conserved Domains (3) summary
    cd05835
    Location:235 → 321
    Dnmt3b_related; The PWWP domain is an essential component of DNA methyltransferase 3 B (Dnmt3b) which is responsible for establishing DNA methylation patterns during embryogenesis and gametogenesis. In tumorigenesis, DNA methylation by Dnmt3b is known to play a role in ...
    cd11728
    Location:423 → 542
    ADDz_Dnmt3b; ADDz domain found in DNA (cytosine-5) methyltransferases (C5-MTases) 3b (Dnmt3b)
    cl30459
    Location:567 → 749
    Cyt_C5_DNA_methylase; Cytosine-C5 specific DNA methylases; Methyl transfer reactions play an important role in many aspects of biology. Cytosine-specific DNA methylases are found both in prokaryotes and eukaryotes. DNA methylation, or the covalent addition of a methyl group ...

  2. XM_035455777.1 → XP_035311668.1  DNA (cytosine-5)-methyltransferase 3B isoform X5

    UniProtKB/TrEMBL
    A0A9J7H3N5, G3HE87
    Conserved Domains (3) summary
    cd05835
    Location:152 → 238
    Dnmt3b_related; The PWWP domain is an essential component of DNA methyltransferase 3 B (Dnmt3b) which is responsible for establishing DNA methylation patterns during embryogenesis and gametogenesis. In tumorigenesis, DNA methylation by Dnmt3b is known to play a role in ...
    cl28890
    Location:340 → 459
    FYVE_like_SF; FYVE domain like superfamily
    cl30459
    Location:484 → 646
    Cyt_C5_DNA_methylase; Cytosine-C5 specific DNA methylases; Methyl transfer reactions play an important role in many aspects of biology. Cytosine-specific DNA methylases are found both in prokaryotes and eukaryotes. DNA methylation, or the covalent addition of a methyl group ...

  3. XM_035455776.1 → XP_035311667.1  DNA (cytosine-5)-methyltransferase 3B isoform X4

    UniProtKB/TrEMBL
    A0A9J7KAL7, G3HE87
    Conserved Domains (3) summary
    cd05835
    Location:193 → 279
    Dnmt3b_related; The PWWP domain is an essential component of DNA methyltransferase 3 B (Dnmt3b) which is responsible for establishing DNA methylation patterns during embryogenesis and gametogenesis. In tumorigenesis, DNA methylation by Dnmt3b is known to play a role in ...
    cd11728
    Location:381 → 500
    ADDz_Dnmt3b; ADDz domain found in DNA (cytosine-5) methyltransferases (C5-MTases) 3b (Dnmt3b)
    cl30459
    Location:525 → 687
    Cyt_C5_DNA_methylase; Cytosine-C5 specific DNA methylases; Methyl transfer reactions play an important role in many aspects of biology. Cytosine-specific DNA methylases are found both in prokaryotes and eukaryotes. DNA methylation, or the covalent addition of a methyl group ...

  4. XM_035455775.1 → XP_035311666.1  DNA (cytosine-5)-methyltransferase 3B isoform X3

    UniProtKB/TrEMBL
    A0A8C2M3G4, A0A9J7H439
    Conserved Domains (3) summary
    cd05835
    Location:235 → 321
    Dnmt3b_related; The PWWP domain is an essential component of DNA methyltransferase 3 B (Dnmt3b) which is responsible for establishing DNA methylation patterns during embryogenesis and gametogenesis. In tumorigenesis, DNA methylation by Dnmt3b is known to play a role in ...
    cd11728
    Location:423 → 542
    ADDz_Dnmt3b; ADDz domain found in DNA (cytosine-5) methyltransferases (C5-MTases) 3b (Dnmt3b)
    cl30459
    Location:567 → 729
    Cyt_C5_DNA_methylase; Cytosine-C5 specific DNA methylases; Methyl transfer reactions play an important role in many aspects of biology. Cytosine-specific DNA methylases are found both in prokaryotes and eukaryotes. DNA methylation, or the covalent addition of a methyl group ...

  5. XM_035455774.1 → XP_035311665.1  DNA (cytosine-5)-methyltransferase 3B isoform X2

    UniProtKB/TrEMBL
    A0A8C2LVC0, A0A8C2M3G4
    Conserved Domains (3) summary
    cd05835
    Location:235 → 321
    Dnmt3b_related; The PWWP domain is an essential component of DNA methyltransferase 3 B (Dnmt3b) which is responsible for establishing DNA methylation patterns during embryogenesis and gametogenesis. In tumorigenesis, DNA methylation by Dnmt3b is known to play a role in ...
    cd11728
    Location:443 → 562
    ADDz_Dnmt3b; ADDz domain found in DNA (cytosine-5) methyltransferases (C5-MTases) 3b (Dnmt3b)
    cl30459
    Location:587 → 749
    Cyt_C5_DNA_methylase; Cytosine-C5 specific DNA methylases; Methyl transfer reactions play an important role in many aspects of biology. Cytosine-specific DNA methylases are found both in prokaryotes and eukaryotes. DNA methylation, or the covalent addition of a methyl group ...

  6. XM_035455773.1 → XP_035311664.1  DNA (cytosine-5)-methyltransferase 3B isoform X1

    UniProtKB/TrEMBL
    A0A8C2LVB0, A0A8C2M3G4
    Conserved Domains (3) summary
    cd05835
    Location:235 → 321
    Dnmt3b_related; The PWWP domain is an essential component of DNA methyltransferase 3 B (Dnmt3b) which is responsible for establishing DNA methylation patterns during embryogenesis and gametogenesis. In tumorigenesis, DNA methylation by Dnmt3b is known to play a role in ...
    cd11728
    Location:443 → 562
    ADDz_Dnmt3b; ADDz domain found in DNA (cytosine-5) methyltransferases (C5-MTases) 3b (Dnmt3b)
    cl30459
    Location:587 → 769
    Cyt_C5_DNA_methylase; Cytosine-C5 specific DNA methylases; Methyl transfer reactions play an important role in many aspects of biology. Cytosine-specific DNA methylases are found both in prokaryotes and eukaryotes. DNA methylation, or the covalent addition of a methyl group ...

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048599.1 Alternate CriGri-PICRH-1.0

    Range
    26318464..26343210 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035446529.1 → XP_035302420.1  DNA (cytosine-5)-methyltransferase 3B isoform X6

    UniProtKB/TrEMBL
    A0A8C2LXU8, A0A8C2M3G4
    Conserved Domains (3) summary
    cd05835
    Location:235 → 321
    Dnmt3b_related; The PWWP domain is an essential component of DNA methyltransferase 3 B (Dnmt3b) which is responsible for establishing DNA methylation patterns during embryogenesis and gametogenesis. In tumorigenesis, DNA methylation by Dnmt3b is known to play a role in ...
    cd11728
    Location:423 → 542
    ADDz_Dnmt3b; ADDz domain found in DNA (cytosine-5) methyltransferases (C5-MTases) 3b (Dnmt3b)
    cl30459
    Location:567 → 749
    Cyt_C5_DNA_methylase; Cytosine-C5 specific DNA methylases; Methyl transfer reactions play an important role in many aspects of biology. Cytosine-specific DNA methylases are found both in prokaryotes and eukaryotes. DNA methylation, or the covalent addition of a methyl group ...

  2. XM_035446528.1 → XP_035302419.1  DNA (cytosine-5)-methyltransferase 3B isoform X5

    UniProtKB/TrEMBL
    A0A9J7H3N5, G3HE87
    Conserved Domains (3) summary
    cd05835
    Location:152 → 238
    Dnmt3b_related; The PWWP domain is an essential component of DNA methyltransferase 3 B (Dnmt3b) which is responsible for establishing DNA methylation patterns during embryogenesis and gametogenesis. In tumorigenesis, DNA methylation by Dnmt3b is known to play a role in ...
    cl28890
    Location:340 → 459
    FYVE_like_SF; FYVE domain like superfamily
    cl30459
    Location:484 → 646
    Cyt_C5_DNA_methylase; Cytosine-C5 specific DNA methylases; Methyl transfer reactions play an important role in many aspects of biology. Cytosine-specific DNA methylases are found both in prokaryotes and eukaryotes. DNA methylation, or the covalent addition of a methyl group ...

  3. XM_035446527.1 → XP_035302418.1  DNA (cytosine-5)-methyltransferase 3B isoform X4

    UniProtKB/TrEMBL
    A0A9J7KAL7, G3HE87
    Conserved Domains (3) summary
    cd05835
    Location:193 → 279
    Dnmt3b_related; The PWWP domain is an essential component of DNA methyltransferase 3 B (Dnmt3b) which is responsible for establishing DNA methylation patterns during embryogenesis and gametogenesis. In tumorigenesis, DNA methylation by Dnmt3b is known to play a role in ...
    cd11728
    Location:381 → 500
    ADDz_Dnmt3b; ADDz domain found in DNA (cytosine-5) methyltransferases (C5-MTases) 3b (Dnmt3b)
    cl30459
    Location:525 → 687
    Cyt_C5_DNA_methylase; Cytosine-C5 specific DNA methylases; Methyl transfer reactions play an important role in many aspects of biology. Cytosine-specific DNA methylases are found both in prokaryotes and eukaryotes. DNA methylation, or the covalent addition of a methyl group ...

  4. XM_035446526.1 → XP_035302417.1  DNA (cytosine-5)-methyltransferase 3B isoform X3

    UniProtKB/TrEMBL
    A0A8C2M3G4, A0A9J7H439
    Related
    ENSCGRP00015041011.1, ENSCGRT00015066815.1
    Conserved Domains (3) summary
    cd05835
    Location:235 → 321
    Dnmt3b_related; The PWWP domain is an essential component of DNA methyltransferase 3 B (Dnmt3b) which is responsible for establishing DNA methylation patterns during embryogenesis and gametogenesis. In tumorigenesis, DNA methylation by Dnmt3b is known to play a role in ...
    cd11728
    Location:423 → 542
    ADDz_Dnmt3b; ADDz domain found in DNA (cytosine-5) methyltransferases (C5-MTases) 3b (Dnmt3b)
    cl30459
    Location:567 → 729
    Cyt_C5_DNA_methylase; Cytosine-C5 specific DNA methylases; Methyl transfer reactions play an important role in many aspects of biology. Cytosine-specific DNA methylases are found both in prokaryotes and eukaryotes. DNA methylation, or the covalent addition of a methyl group ...

  5. XM_035446525.1 → XP_035302416.1  DNA (cytosine-5)-methyltransferase 3B isoform X2

    UniProtKB/TrEMBL
    A0A8C2LVC0, A0A8C2M3G4
    Related
    ENSCGRP00015003675.1, ENSCGRT00015004554.2
    Conserved Domains (3) summary
    cd05835
    Location:235 → 321
    Dnmt3b_related; The PWWP domain is an essential component of DNA methyltransferase 3 B (Dnmt3b) which is responsible for establishing DNA methylation patterns during embryogenesis and gametogenesis. In tumorigenesis, DNA methylation by Dnmt3b is known to play a role in ...
    cd11728
    Location:443 → 562
    ADDz_Dnmt3b; ADDz domain found in DNA (cytosine-5) methyltransferases (C5-MTases) 3b (Dnmt3b)
    cl30459
    Location:587 → 749
    Cyt_C5_DNA_methylase; Cytosine-C5 specific DNA methylases; Methyl transfer reactions play an important role in many aspects of biology. Cytosine-specific DNA methylases are found both in prokaryotes and eukaryotes. DNA methylation, or the covalent addition of a methyl group ...

  6. XM_035446523.1 → XP_035302414.1  DNA (cytosine-5)-methyltransferase 3B isoform X1

    UniProtKB/TrEMBL
    A0A8C2LVB0, A0A8C2M3G4
    Related
    ENSCGRP00015003653.2, ENSCGRT00015004525.2
    Conserved Domains (3) summary
    cd05835
    Location:235 → 321
    Dnmt3b_related; The PWWP domain is an essential component of DNA methyltransferase 3 B (Dnmt3b) which is responsible for establishing DNA methylation patterns during embryogenesis and gametogenesis. In tumorigenesis, DNA methylation by Dnmt3b is known to play a role in ...
    cd11728
    Location:443 → 562
    ADDz_Dnmt3b; ADDz domain found in DNA (cytosine-5) methyltransferases (C5-MTases) 3b (Dnmt3b)
    cl30459
    Location:587 → 769
    Cyt_C5_DNA_methylase; Cytosine-C5 specific DNA methylases; Methyl transfer reactions play an important role in many aspects of biology. Cytosine-specific DNA methylases are found both in prokaryotes and eukaryotes. DNA methylation, or the covalent addition of a methyl group ...
Nucleotide Protein Strain
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