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Slc6a13 solute carrier family 6 member 13 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100752749, updated on 8-Mar-2024

Summary

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Gene symbol
Slc6a13
Gene description
solute carrier family 6 member 13
See related
Ensembl:ENSCGRG00015012609
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 8
Exon count:
14
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614180.1 (430051..464223, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 8 NC_048601.1 (23569175..23603012, complement)

NW_003614180.1Genomic Context describing neighboring genes Neighboring gene IQ motif and Sec7 domain ArfGEF 3 Neighboring gene solute carrier family 6 member 12 Neighboring gene uncharacterized LOC103162264 Neighboring gene ubiquitin specific peptidase 18

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables gamma-aminobutyric acid:sodium:chloride symporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in neurotransmitter transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sodium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sodium- and chloride-dependent GABA transporter 2
Names
solute carrier family 6 (neurotransmitter transporter), member 13
solute carrier family 6 (neurotransmitter transporter, GABA), member 13

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614180.1 Reference CriGri_1.0 Primary Assembly

    Range
    430051..464223 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035457917.1 → XP_035313808.1  sodium- and chloride-dependent GABA transporter 2 isoform X2

    UniProtKB/TrEMBL
    A0A8C2LWP1, A0A9J7H8L0
    Conserved Domains (1) summary
    cl00456
    Location:32 → 483
    SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

  2. XM_035457916.1 → XP_035313807.1  sodium- and chloride-dependent GABA transporter 2 isoform X1

    UniProtKB/TrEMBL
    A0A8C2LWP1
    Conserved Domains (1) summary
    cl00456
    Location:32 → 575
    SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048601.1 Alternate CriGri-PICRH-1.0

    Range
    23569175..23603012 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035448760.1 → XP_035304651.1  sodium- and chloride-dependent GABA transporter 2 isoform X2

    UniProtKB/TrEMBL
    A0A8C2LWP1, A0A9J7H8L0
    Conserved Domains (1) summary
    cl00456
    Location:32 → 483
    SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

  2. XM_035448759.1 → XP_035304650.1  sodium- and chloride-dependent GABA transporter 2 isoform X1

    UniProtKB/TrEMBL
    A0A8C2LWP1, A0A9J7H4H3
    Related
    ENSCGRP00015016426.1, ENSCGRT00015020162.2
    Conserved Domains (1) summary
    cl00456
    Location:32 → 575
    SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain
Nucleotide Protein Strain
Heading Accession and Version

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