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Hdc histidine decarboxylase [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100753889, updated on 8-Mar-2024

Summary

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Gene symbol
Hdc
Gene description
histidine decarboxylase
Locus tag
I79_003500
See related
Ensembl:ENSCGRG00015016360
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
12
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613665.1 (2694377..2713967)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 6 NC_048599.1 (51918039..51937649)

NW_003613665.1Genomic Context describing neighboring genes Neighboring gene ubiquitin specific peptidase 8 Neighboring gene U1 spliceosomal RNA Neighboring gene GA binding protein transcription factor subunit beta 1 Neighboring gene solute carrier family 27 member 2 Neighboring gene ATPase phospholipid transporting 8B4 (putative)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables histidine decarboxylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in histamine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in histidine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
histidine decarboxylase
Names
histidine decarboxylase-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613665.1 Reference CriGri_1.0 Primary Assembly

    Range
    2694377..2713967
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003497817.5 → XP_003497865.1  histidine decarboxylase isoform X1

    See identical proteins and their annotated locations for XP_003497865.1

    UniProtKB/TrEMBL
    A0A8C2QNK5, A0A9J7G5U1, G3H052
    Conserved Domains (1) summary
    pfam00282
    Location:36 → 414
    Pyridoxal_deC; Pyridoxal-dependent decarboxylase conserved domain

  2. XM_035443101.1 → XP_035298992.1  histidine decarboxylase isoform X2

    UniProtKB/TrEMBL
    A0A8C2QNK5, A0A9J7H567, G3H052
    Conserved Domains (1) summary
    pfam00282
    Location:36 → 381
    Pyridoxal_deC; Pyridoxal-dependent decarboxylase conserved domain

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048599.1 Alternate CriGri-PICRH-1.0

    Range
    51918039..51937649
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027421928.2 → XP_027277729.1  histidine decarboxylase isoform X1

    UniProtKB/TrEMBL
    A0A8C2QNK5, A0A9J7G5U1, G3H052
    Related
    ENSCGRP00015021462.2, ENSCGRT00015026367.2

  2. XM_035446760.1 → XP_035302651.1  histidine decarboxylase isoform X2

    UniProtKB/TrEMBL
    A0A8C2QNK5, A0A9J7H567, G3H052
    Conserved Domains (1) summary
    pfam00282
    Location:36 → 381
    Pyridoxal_deC; Pyridoxal-dependent decarboxylase conserved domain
Nucleotide Protein Strain
Heading Accession and Version

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