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Prkcsh PRKCSH beta subunit of glucosidase II [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100753910, updated on 8-Mar-2024

Summary

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Gene symbol
Prkcsh
Gene description
PRKCSH beta subunit of glucosidase II
Locus tag
I79_005851
See related
Ensembl:ENSCGRG00015003311
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
19
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613752.1 (175805..190567, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 4 NC_048597.1 (134900921..134915403)

NW_003613752.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 653 Neighboring gene ELAV like RNA binding protein 3 Neighboring gene outer dynein arm docking complex subunit 3 Neighboring gene ral guanine nucleotide dissociation stimulator like 3 Neighboring gene erythropoietin receptor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-glycan processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in liver development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of glucosidase II complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glucosidase 2 subunit beta
Names
Glucosidase 2 subunit beta
protein kinase C substrate 80K-H

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613752.1 Reference CriGri_1.0 Primary Assembly

    Range
    175805..190567 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016974295.3 → XP_016829784.1  glucosidase 2 subunit beta isoform X1

    UniProtKB/TrEMBL
    A0A061I824, A0A9J7K7Y9
    Conserved Domains (2) summary
    pfam12999
    Location:21 → 173
    PRKCSH-like; Glucosidase II beta subunit-like
    cl06793
    Location:384 → 512
    PRKCSH; Glucosidase II beta subunit-like protein

  2. XM_003499715.4 → XP_003499763.1  glucosidase 2 subunit beta isoform X2

    UniProtKB/TrEMBL
    A0A061I785, A0A8C2MW75
    Conserved Domains (2) summary
    pfam12999
    Location:21 → 173
    PRKCSH-like; Glucosidase II beta subunit-like
    cl06793
    Location:377 → 505
    PRKCSH; Glucosidase II beta subunit-like protein

  3. XM_007640450.3 → XP_007638640.1  glucosidase 2 subunit beta isoform X1

    See identical proteins and their annotated locations for XP_007638640.1

    UniProtKB/TrEMBL
    A0A061I824, A0A9J7K7Y9
    Conserved Domains (2) summary
    pfam12999
    Location:21 → 173
    PRKCSH-like; Glucosidase II beta subunit-like
    cl06793
    Location:384 → 512
    PRKCSH; Glucosidase II beta subunit-like protein

  4. XM_007640451.4 → XP_007638641.1  glucosidase 2 subunit beta isoform X1

    See identical proteins and their annotated locations for XP_007638641.1

    UniProtKB/TrEMBL
    A0A061I824, A0A9J7K7Y9
    Conserved Domains (2) summary
    pfam12999
    Location:21 → 173
    PRKCSH-like; Glucosidase II beta subunit-like
    cl06793
    Location:384 → 512
    PRKCSH; Glucosidase II beta subunit-like protein

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048597.1 Alternate CriGri-PICRH-1.0

    Range
    134900921..134915403
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035443529.1 → XP_035299420.1  glucosidase 2 subunit beta isoform X1

    UniProtKB/TrEMBL
    A0A061I824, A0A9J7K7Y9
    Related
    ENSCGRP00015045752.1, ENSCGRT00015067236.1
    Conserved Domains (2) summary
    pfam12999
    Location:21 → 173
    PRKCSH-like; Glucosidase II beta subunit-like
    cl06793
    Location:384 → 512
    PRKCSH; Glucosidase II beta subunit-like protein

  2. XM_035443528.1 → XP_035299419.1  glucosidase 2 subunit beta isoform X1

    UniProtKB/TrEMBL
    A0A061I824, A0A9J7K7Y9
    Conserved Domains (2) summary
    pfam12999
    Location:21 → 173
    PRKCSH-like; Glucosidase II beta subunit-like
    cl06793
    Location:384 → 512
    PRKCSH; Glucosidase II beta subunit-like protein

  3. XM_035443530.1 → XP_035299421.1  glucosidase 2 subunit beta isoform X2

    UniProtKB/TrEMBL
    A0A061I785, A0A8C2MW75
    Related
    ENSCGRP00015004244.2, ENSCGRT00015005260.2
    Conserved Domains (2) summary
    pfam12999
    Location:21 → 173
    PRKCSH-like; Glucosidase II beta subunit-like
    cl06793
    Location:377 → 505
    PRKCSH; Glucosidase II beta subunit-like protein
Nucleotide Protein Strain
Heading Accession and Version

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