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Galns galactosamine (N-acetyl)-6-sulfatase [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100753973, updated on 8-Mar-2024

Summary

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Gene symbol
Galns
Gene description
galactosamine (N-acetyl)-6-sulfatase
Locus tag
I79_000223
See related
Ensembl:ENSCGRG00015020972
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
13
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613583.1 (925395..958873)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 3 NC_048596.1 (199228719..199267994, complement)

NW_003613583.1Genomic Context describing neighboring genes Neighboring gene PABPN1 like, cytoplasmic Neighboring gene trafficking protein particle complex subunit 2L Neighboring gene uncharacterized LOC118237970 Neighboring gene adenine phosphoribosyltransferase Neighboring gene chromatin licensing and DNA replication factor 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables N-acetylgalactosamine-6-sulfatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables arylsulfatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
N-acetylgalactosamine-6-sulfatase
Names
galactosamine (N-acetyl)-6-sulfate sulfatase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613583.1 Reference CriGri_1.0 Primary Assembly

    Range
    925395..958873
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007652583.1 → XP_007650773.1  N-acetylgalactosamine-6-sulfatase isoform X1

    UniProtKB/TrEMBL
    G3GRS9
    Conserved Domains (2) summary
    PRK13759
    Location:31 → 476
    PRK13759; arylsulfatase; Provisional
    cd16157
    Location:30 → 495
    GALNS; galactosamine-6-sulfatase; also known as N-acetylgalactosamine-6-sulfatase (GALNS)

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048596.1 Alternate CriGri-PICRH-1.0

    Range
    199228719..199267994 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027410648.2 → XP_027266449.1  N-acetylgalactosamine-6-sulfatase isoform X5

    UniProtKB/TrEMBL
    A0A8C2QET5, A0A9J7FTD8
    Related
    ENSCGRP00015027769.1, ENSCGRT00015034020.2

  2. XM_027410647.2 → XP_027266448.1  N-acetylgalactosamine-6-sulfatase isoform X4

    UniProtKB/TrEMBL
    A0A061IFE6, A0A9J7FRA5

  3. XM_027410643.2 → XP_027266444.1  N-acetylgalactosamine-6-sulfatase isoform X2

    UniProtKB/TrEMBL
    A0A9J7JF32, G3GRS9
    Related
    ENSCGRP00015027745.1, ENSCGRT00015033994.2

  4. XM_027410645.2 → XP_027266446.1  N-acetylgalactosamine-6-sulfatase isoform X3

    UniProtKB/TrEMBL
    A0A9J7JLG4, G3GRS9

  5. XM_027410644.2 → XP_027266445.1  N-acetylgalactosamine-6-sulfatase isoform X3

    UniProtKB/TrEMBL
    A0A9J7JLG4, G3GRS9
    Related
    ENSCGRP00015027786.2, ENSCGRT00015034042.2
Nucleotide Protein Strain
Heading Accession and Version

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