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Alg13 ALG13 UDP-N-acetylglucosaminyltransferase subunit [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100754023, updated on 8-Mar-2024

Summary

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Gene symbol
Alg13
Gene description
ALG13 UDP-N-acetylglucosaminyltransferase subunit
Locus tag
I79_012611
See related
Ensembl:ENSCGRG00015015970
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: X
Exon count:
23
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614148.1 (824645..878688, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) X NC_048604.1 (36370055..36426186, complement)

NW_003614148.1Genomic Context describing neighboring genes Neighboring gene retrotransposon Gag like 4 Neighboring gene transient receptor potential cation channel subfamily C member 5 Neighboring gene serine rich and transmembrane domain containing 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in dolichol-linked oligosaccharide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13
Names
OTU domain-containing protein 4
asparagine-linked glycosylation 13 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614148.1 Reference CriGri_1.0 Primary Assembly

    Range
    824645..878688 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035457746.1 → XP_035313637.1  putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13 isoform X1

    Conserved Domains (3) summary
    PRK00553
    Location:91 → 169
    PRK00553; ribose-phosphate pyrophosphokinase; Provisional
    cl02573
    Location:306 → 383
    Tudor_SF; Tudor domain superfamily
    cl10013
    Location:5 → 120
    Glycosyltransferase_GTB-type; glycosyltransferase family 1 and related proteins with GTB topology

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048604.1 Alternate CriGri-PICRH-1.0

    Range
    36370055..36426186 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035449861.1 → XP_035305752.1  putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13 isoform X2

    UniProtKB/TrEMBL
    A0A9J7KDB4
    Conserved Domains (3) summary
    PRK00553
    Location:91 → 169
    PRK00553; ribose-phosphate pyrophosphokinase; Provisional
    cl02573
    Location:306 → 383
    Tudor_SF; Tudor domain superfamily
    cl10013
    Location:5 → 120
    Glycosyltransferase_GTB-type; glycosyltransferase family 1 and related proteins with GTB topology

  2. XM_027433566.2 → XP_027289367.1  putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13 isoform X4

    UniProtKB/TrEMBL
    A0A9J7GKA4

  3. XM_027433569.2 → XP_027289370.1  putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13 isoform X6

    UniProtKB/TrEMBL
    A0A9J7K394

  4. XM_035449862.1 → XP_035305753.1  putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13 isoform X3

    UniProtKB/TrEMBL
    A0A9J7H9D6
    Related
    ENSCGRP00015053033.1, ENSCGRT00015083773.1
    Conserved Domains (2) summary
    cl02573
    Location:286 → 363
    Tudor_SF; Tudor domain superfamily
    cl19932
    Location:36 → 115
    OTU; OTU-like cysteine protease

  5. XM_027433568.2 → XP_027289369.1  putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13 isoform X6

    UniProtKB/TrEMBL
    A0A9J7K394

  6. XM_027433567.2 → XP_027289368.1  putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13 isoform X5

    UniProtKB/TrEMBL
    A0A9J7GQB2

  7. XM_027433572.2 → XP_027289373.1  putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13 isoform X8

    UniProtKB/TrEMBL
    A0A8C2ME62
    Related
    ENSCGRP00015049467.1, ENSCGRT00015070496.1

  8. XM_027433571.2 → XP_027289372.1  putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13 isoform X7

    UniProtKB/TrEMBL
    A0A061HXS5
    Related
    ENSCGRP00015020920.1, ENSCGRT00015025715.2

  9. XM_035449863.1 → XP_035305754.1  putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13 isoform X9

    UniProtKB/TrEMBL
    A0A9J7H8K2
    Related
    ENSCGRP00015054223.1, ENSCGRT00015074148.1
    Conserved Domains (1) summary
    cl10013
    Location:5 → 120
    Glycosyltransferase_GTB-type; glycosyltransferase family 1 and related proteins with GTB topology

RNA

  1. XR_004771386.1 RNA Sequence

  2. XR_003488533.2 RNA Sequence

  3. XR_004771387.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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