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St3gal5 ST3 beta-galactoside alpha-2,3-sialyltransferase 5 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100754838, updated on 8-Mar-2024

Summary

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Gene symbol
St3gal5
Gene description
ST3 beta-galactoside alpha-2,3-sialyltransferase 5
See related
Ensembl:ENSCGRG00015016707
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 8
Exon count:
7
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003615292.1 (83253..110157, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 8 NC_048601.1 (63811584..63864890)

NW_003615292.1Genomic Context describing neighboring genes Neighboring gene protein atonal homolog 8 Neighboring gene guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 Neighboring gene RNA polymerase I subunit A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lactosylceramide alpha-2,3-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lactosylceramide alpha-2,3-sialyltransferase
Names
Lactosylceramide alpha-2,3-sialyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003615292.1 Reference CriGri_1.0 Primary Assembly

    Range
    83253..110157 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003511952.3 → XP_003512000.1  lactosylceramide alpha-2,3-sialyltransferase isoform X1

    See identical proteins and their annotated locations for XP_003512000.1

    UniProtKB/TrEMBL
    A0A8C2LE61, G3IAH7
    Conserved Domains (1) summary
    pfam00777
    Location:116 → 382
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  2. XM_027384197.2 → XP_027239998.1  lactosylceramide alpha-2,3-sialyltransferase isoform X2

    UniProtKB/TrEMBL
    A0A9J7K8T8
    Conserved Domains (1) summary
    pfam00777
    Location:115 → 295
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048601.1 Alternate CriGri-PICRH-1.0

    Range
    63811584..63864890
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035448628.1 → XP_035304519.1  lactosylceramide alpha-2,3-sialyltransferase isoform X2

    UniProtKB/TrEMBL
    A0A9J7K8T8
    Conserved Domains (1) summary
    pfam00777
    Location:115 → 295
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  2. XM_027429502.2 → XP_027285303.1  lactosylceramide alpha-2,3-sialyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A8C2LE61, G3IAH7
    Related
    ENSCGRP00015021940.2, ENSCGRT00015026944.2

  3. XM_027429501.2 → XP_027285302.1  lactosylceramide alpha-2,3-sialyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A8C2LE61, G3IAH7
    Related
    ENSCGRP00015021953.2, ENSCGRT00015026960.2
Nucleotide Protein Strain
Heading Accession and Version

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