U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Slc13a5 solute carrier family 13 member 5 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100754900, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
Slc13a5
Gene description
solute carrier family 13 member 5
See related
Ensembl:ENSCGRG00015002060
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See Slc13a5 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
13
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614234.1 (679977..703685)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 7 NC_048600.1 (86085388..86109325, complement)

NW_003614234.1Genomic Context describing neighboring genes Neighboring gene F-box protein 39 Neighboring gene XIAP associated factor 1 Neighboring gene uncharacterized protein C17orf100 homolog Neighboring gene mediator complex subunit 31

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables citrate transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sodium:dicarboxylate symporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables succinate transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in citrate transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in monoatomic anion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
LOW QUALITY PROTEIN: solute carrier family 13 member 5; solute carrier family 13 member 5
Names
solute carrier family 13 (sodium-dependent citrate transporter), member 5

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614234.1 Reference CriGri_1.0 Primary Assembly

    Range
    679977..703685
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035458331.1 → XP_035314222.1  LOW QUALITY PROTEIN: solute carrier family 13 member 5 isoform X1

    UniProtKB/TrEMBL
    A0A8C2MP13
    Conserved Domains (1) summary
    cl21473
    Location:69 → 608
    ArsB_NhaD_permease; Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, antimonite, sulfate and organic anions across biological membranes in all three kingdoms of life. A typical anion permease contains 8-13 transmembrane helices ...

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048600.1 Alternate CriGri-PICRH-1.0

    Range
    86085388..86109325 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027426833.2 → XP_027282634.2  solute carrier family 13 member 5 isoform X2

    UniProtKB/TrEMBL
    A0A8C2MP13, A0A9J7GHY1
    Conserved Domains (1) summary
    cl21473
    Location:69 → 596
    ArsB_NhaD_permease; Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, antimonite, sulfate and organic anions across biological membranes in all three kingdoms of life. A typical anion permease contains 8-13 transmembrane helices ...

  2. XM_035448240.1 → XP_035304131.1  solute carrier family 13 member 5 isoform X4

    UniProtKB/TrEMBL
    A0A8C2MP13, A0A8C2QLR9
    Related
    ENSCGRP00015002753.1, ENSCGRT00015003407.2
    Conserved Domains (1) summary
    cl21473
    Location:39 → 515
    ArsB_NhaD_permease; Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, antimonite, sulfate and organic anions across biological membranes in all three kingdoms of life. A typical anion permease contains 8-13 transmembrane helices ...

  3. XM_035448239.1 → XP_035304130.1  solute carrier family 13 member 5 isoform X3

    UniProtKB/TrEMBL
    A0A8C2MP13, A0A9J7H6V5
    Related
    ENSCGRP00015002749.1, ENSCGRT00015003399.2
    Conserved Domains (1) summary
    cl21473
    Location:31 → 541
    ArsB_NhaD_permease; Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, antimonite, sulfate and organic anions across biological membranes in all three kingdoms of life. A typical anion permease contains 8-13 transmembrane helices ...

  4. XM_035448242.1 → XP_035304133.1  solute carrier family 13 member 5 isoform X6

    UniProtKB/TrEMBL
    A0A8C2MP13, A0A9J7H5S7
    Conserved Domains (1) summary
    cd01115
    Location:39 → 479
    SLC13_permease; Permease SLC13 (solute carrier 13). The sodium/dicarboxylate cotransporter NaDC-1 has been shown to translocate Krebs cycle intermediates such as succinate, citrate, and alpha-ketoglutarate across plasma membranes rabbit, human, and rat kidney. It is ...

  5. XM_035448241.1 → XP_035304132.1  solute carrier family 13 member 5 isoform X5

    UniProtKB/TrEMBL
    A0A8C2MP13, A0A9J7H6K8
    Related
    ENSCGRP00015002764.1, ENSCGRT00015003423.2
    Conserved Domains (1) summary
    cl21473
    Location:31 → 486
    ArsB_NhaD_permease; Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, antimonite, sulfate and organic anions across biological membranes in all three kingdoms of life. A typical anion permease contains 8-13 transmembrane helices ...
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.