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Suv39h2 SUV39H2 histone lysine methyltransferase [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100755145, updated on 8-Mar-2024

Summary

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Gene symbol
Suv39h2
Gene description
SUV39H2 histone lysine methyltransferase
See related
Ensembl:ENSCGRG00015021394
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
5
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613621.1 (3728376..3747423)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 3 NC_048596.1 (220756841..220778286, complement)

NW_003613621.1Genomic Context describing neighboring genes Neighboring gene cerebral dopamine neurotrophic factor Neighboring gene heat shock protein family A (Hsp70) member 14 Neighboring gene Myb/SANT DNA binding domain containing 7 Neighboring gene DNA cross-link repair 1C Neighboring gene meiosis/spermiogenesis associated 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables histone H3K9 methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
histone-lysine N-methyltransferase SUV39H2
Names
suppressor of variegation 3-9 homolog 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613621.1 Reference CriGri_1.0 Primary Assembly

    Range
    3728376..3747423
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035460775.1 → XP_035316666.1  histone-lysine N-methyltransferase SUV39H2 isoform X1

    UniProtKB/TrEMBL
    A0A8C2QIF4, A0A9J7FM12
    Conserved Domains (2) summary
    cd18639
    Location:47 → 95
    CD_SUV39H1_like; chromodomain of histone methyltransferase SUV39H1, and similar proteins
    cd10532
    Location:167 → 409
    SET_SUV39H2; SET domain (including pre-SET and post-SET domains) found in suppressor of variegation 3-9 homolog 2 (SUV39H2) and similar proteins

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048596.1 Alternate CriGri-PICRH-1.0

    Range
    220756841..220778286 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027405216.1 → XP_027261017.1  histone-lysine N-methyltransferase SUV39H2 isoform X2

    UniProtKB/TrEMBL
    A0A8C2QIF4, A0A9J7FM12
    Related
    ENSCGRP00015028296.1, ENSCGRT00015034653.2
    Conserved Domains (2) summary
    cd18639
    Location:47 → 95
    CD_SUV39H1_like; chromodomain of histone methyltransferase SUV39H1, and similar proteins
    cd10532
    Location:167 → 409
    SET_SUV39H2; SET domain (including pre-SET and post-SET domains) found in suppressor of variegation 3-9 homolog 2 (SUV39H2) and similar proteins

  2. XM_027405220.2 → XP_027261021.1  histone-lysine N-methyltransferase SUV39H2 isoform X5

    UniProtKB/TrEMBL
    A0A9J7FND8

  3. XM_027405219.2 → XP_027261020.1  histone-lysine N-methyltransferase SUV39H2 isoform X4

    UniProtKB/TrEMBL
    A0A9J7FJW5

  4. XM_027405218.2 → XP_027261019.1  histone-lysine N-methyltransferase SUV39H2 isoform X3

    UniProtKB/TrEMBL
    A0A9J7FLT6
Nucleotide Protein Strain
Heading Accession and Version

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