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Smpd3 sphingomyelin phosphodiesterase 3 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100755276, updated on 8-Mar-2024

Summary

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Gene symbol
Smpd3
Gene description
sphingomyelin phosphodiesterase 3
Locus tag
I79_011333
See related
Ensembl:ENSCGRG00015008841
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
7
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614050.1 (746256..756533)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 3 NC_048596.1 (182577648..182588511, complement)

NW_003614050.1Genomic Context describing neighboring genes Neighboring gene ZFP90 zinc finger protein Neighboring gene glyceraldehyde-3-phosphate dehydrogenase-like Neighboring gene protein arginine methyltransferase 7 Neighboring gene solute carrier family 7 member 6 opposite strand

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sphingomyelin phosphodiesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in sphingomyelin metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sphingomyelin phosphodiesterase 3
Names
sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)
sphingomyelin phosphodiesterase 3-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614050.1 Reference CriGri_1.0 Primary Assembly

    Range
    746256..756533
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035457068.1 → XP_035312959.1  sphingomyelin phosphodiesterase 3 isoform X1

    UniProtKB/TrEMBL
    G3HKV1
    Conserved Domains (1) summary
    cl00490
    Location:233 → 439
    EEP; Exonuclease-Endonuclease-Phosphatase (EEP) domain superfamily

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048596.1 Alternate CriGri-PICRH-1.0

    Range
    182577648..182588511 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027405917.2 → XP_027261718.1  sphingomyelin phosphodiesterase 3 isoform X2

    UniProtKB/TrEMBL
    A0A8C2QH58, A0A9J7FPD5
    Related
    ENSCGRP00015011521.1, ENSCGRT00015014118.2
Nucleotide Protein Strain
Heading Accession and Version

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