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Hpse heparanase [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100755610, updated on 8-Mar-2024

Summary

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Gene symbol
Hpse
Gene description
heparanase
Locus tag
I79_020442
See related
Ensembl:ENSCGRG00015019956
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
12
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003615246.1 (9212..45178)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 1 Unlocalized Scaffold NW_023276807.1 (162740381..162776259, complement)

NW_003615246.1Genomic Context describing neighboring genes Neighboring gene coenzyme Q2, polyprenyltransferase Neighboring gene zinc finger Ran-binding domain-containing protein 2-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydrolase activity, acting on glycosyl bonds IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparanase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003615246.1 Reference CriGri_1.0 Primary Assembly

    Range
    9212..45178
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003511836.5 → XP_003511884.1  heparanase

    See identical proteins and their annotated locations for XP_003511884.1

    UniProtKB/TrEMBL
    A0A061INU8, A0A8C2QIM7
    Conserved Domains (1) summary
    pfam03662
    Location:166 → 365
    Glyco_hydro_79n; Glycosyl hydrolase family 79, N-terminal domain

Alternate CriGri-PICRH-1.0

Genomic

  1. NW_023276807.1 Alternate CriGri-PICRH-1.0

    Range
    162740381..162776259 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027388541.2 → XP_027244342.1  heparanase

    UniProtKB/TrEMBL
    A0A061INU8, A0A8C2QIM7
    Related
    ENSCGRP00015026300.1, ENSCGRT00015032226.2
Nucleotide Protein Strain
Heading Accession and Version

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