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Slc18a1 solute carrier family 18 member A1 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100755842, updated on 8-Mar-2024

Summary

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Gene symbol
Slc18a1
Gene description
solute carrier family 18 member A1
Locus tag
I79_006078
See related
Ensembl:ENSCGRG00015028492
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
15
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613760.1 (1418575..1446051, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 1 Unlocalized Scaffold NW_023276806.1 (245737882..245765405, complement)

NW_003613760.1Genomic Context describing neighboring genes Neighboring gene lipoprotein lipase Neighboring gene small nucleolar RNA SNORA70 Neighboring gene ATPase H+ transporting V1 subunit B2 Neighboring gene leucine zipper tumor suppressor 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables serotonin:sodium:chloride symporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables xenobiotic transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in aminergic neurotransmitter loading into synaptic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in xenobiotic transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in synaptic vesicle membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in terminal bouton IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chromaffin granule amine transporter
Names
Chromaffin granule amine transporter
solute carrier family 18 (vesicular monoamine transporter), member 1
solute carrier family 18 (vesicular monoamine), member 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613760.1 Reference CriGri_1.0 Primary Assembly

    Range
    1418575..1446051 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035454184.1 → XP_035310075.1  chromaffin granule amine transporter isoform X2

    UniProtKB/TrEMBL
    A0A9J7HCS4
    Conserved Domains (1) summary
    cd17384
    Location:127 → 443
    MFS_SLC18A1_2_VAT1_2; Vesicular amine transporters 1 (VAT1) and 2 (VAT2), and similar transporters of the Major Facilitator Superfamily

  2. XM_035454185.1 → XP_035310076.1  chromaffin granule amine transporter isoform X3

    UniProtKB/TrEMBL
    A0A9J7HBY4
    Conserved Domains (1) summary
    cd17384
    Location:127 → 441
    MFS_SLC18A1_2_VAT1_2; Vesicular amine transporters 1 (VAT1) and 2 (VAT2), and similar transporters of the Major Facilitator Superfamily

  3. XM_003499929.5 → XP_003499977.1  chromaffin granule amine transporter isoform X1

    UniProtKB/TrEMBL
    A0A061INU7, A0A8C2MMN4
    Conserved Domains (3) summary
    cd06174
    Location:299 → 475
    MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
    TIGR00880
    Location:137 → 278
    2_A_01_02; Multidrug resistance protein
    pfam07690
    Location:136 → 442
    MFS_1; Major Facilitator Superfamily

Alternate CriGri-PICRH-1.0

Genomic

  1. NW_023276806.1 Alternate CriGri-PICRH-1.0

    Range
    245737882..245765405 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035451880.1 → XP_035307771.1  chromaffin granule amine transporter isoform X2

    UniProtKB/TrEMBL
    A0A9J7HCS4
    Conserved Domains (1) summary
    cd17384
    Location:127 → 443
    MFS_SLC18A1_2_VAT1_2; Vesicular amine transporters 1 (VAT1) and 2 (VAT2), and similar transporters of the Major Facilitator Superfamily

  2. XM_035451881.1 → XP_035307772.1  chromaffin granule amine transporter isoform X3

    UniProtKB/TrEMBL
    A0A9J7HBY4
    Conserved Domains (1) summary
    cd17384
    Location:127 → 441
    MFS_SLC18A1_2_VAT1_2; Vesicular amine transporters 1 (VAT1) and 2 (VAT2), and similar transporters of the Major Facilitator Superfamily

  3. XM_027388859.2 → XP_027244660.1  chromaffin granule amine transporter isoform X1

    UniProtKB/TrEMBL
    A0A061INU7, A0A8C2MMN4
    Related
    ENSCGRP00015038104.1, ENSCGRT00015046409.2
Nucleotide Protein Strain
Heading Accession and Version

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