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St6galnac6 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100757138, updated on 8-Mar-2024

Summary

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Gene symbol
St6galnac6
Gene description
ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6
Locus tag
I79_014776
See related
Ensembl:ENSCGRG00015005750
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
7
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614338.1 (193130..205237)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 6 NC_048599.1 (144326308..144338908)

NW_003614338.1Genomic Context describing neighboring genes Neighboring gene phosphatidylinositol-4-phosphate 5-kinase like 1 Neighboring gene ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 Neighboring gene adenylate kinase 1 Neighboring gene endoglin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ganglioside biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in oligosaccharide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6
Names
Alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6
ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614338.1 Reference CriGri_1.0 Primary Assembly

    Range
    193130..205237
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035458929.1 → XP_035314820.1  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 isoform X3

    UniProtKB/TrEMBL
    A0A9J7G905
    Conserved Domains (1) summary
    pfam00777
    Location:90 → 255
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  2. XM_016977969.3 → XP_016833458.1  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 isoform X1

  3. XM_003507166.5 → XP_003507214.2  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 isoform X2

    See identical proteins and their annotated locations for XP_003507214.2

    UniProtKB/TrEMBL
    A0A8C2M6K4
    Conserved Domains (1) summary
    pfam00777
    Location:130 → 351
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  4. XM_027439841.2 → XP_027295642.1  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 isoform X3

    UniProtKB/TrEMBL
    A0A9J7G905
    Conserved Domains (1) summary
    pfam00777
    Location:90 → 255
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048599.1 Alternate CriGri-PICRH-1.0

    Range
    144326308..144338908
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027423794.2 → XP_027279595.1  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 isoform X4

    UniProtKB/TrEMBL
    A0A9J7GB63
    Related
    ENSCGRP00015007724.2, ENSCGRT00015009522.2

  2. XM_027423795.2 → XP_027279596.1  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 isoform X5

    UniProtKB/TrEMBL
    A0A8C2M4D9, A0A8C2M6K4
    Related
    ENSCGRP00015058987.1, ENSCGRT00015055090.1

  3. XM_027423796.2 → XP_027279597.1  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 isoform X3

    UniProtKB/TrEMBL
    A0A9J7G905
    Related
    ENSCGRP00015052210.1, ENSCGRT00015056536.1
    Conserved Domains (1) summary
    pfam00777
    Location:90 → 255
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
Nucleotide Protein Strain
Heading Accession and Version

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