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Pygm glycogen phosphorylase, muscle associated [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100757350, updated on 8-Mar-2024

Summary

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Gene symbol
Pygm
Gene description
glycogen phosphorylase, muscle associated
Locus tag
I79_019080
See related
Ensembl:ENSCGRG00015013236
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
20
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614946.1 (154463..171002, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 3 NC_048596.1 (52957005..52973421, complement)

NW_003614946.1Genomic Context describing neighboring genes Neighboring gene neurexin 2 Neighboring gene RAS guanyl releasing protein 2 Neighboring gene splicing factor 1 Neighboring gene mitogen-activated protein kinase kinase kinase kinase 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycogen phosphorylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycogen catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycogen phosphorylase, muscle form
Names
Glycogen phosphorylase, muscle form
muscle glycogen phosphorylase
phosphorylase, glycogen, muscle

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614946.1 Reference CriGri_1.0 Primary Assembly

    Range
    154463..171002 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003510709.5 → XP_003510757.4  glycogen phosphorylase, muscle form

    UniProtKB/TrEMBL
    A0A8C2MFS5
    Conserved Domains (1) summary
    cd04300
    Location:72 → 871
    GT35_Glycogen_Phosphorylase; glycogen phosphorylase and similar proteins

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048596.1 Alternate CriGri-PICRH-1.0

    Range
    52957005..52973421 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027408484.2 → XP_027264285.2  glycogen phosphorylase, muscle form

    UniProtKB/TrEMBL
    A0A8C2MFS5, A0A9J7JK01
    Related
    ENSCGRP00015017197.1, ENSCGRT00015021142.2
    Conserved Domains (1) summary
    cd04300
    Location:72 → 871
    GT35_Glycogen_Phosphorylase; glycogen phosphorylase and similar proteins
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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