U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

P4ha1 prolyl 4-hydroxylase subunit alpha 1 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100757890, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
P4ha1
Gene description
prolyl 4-hydroxylase subunit alpha 1
Locus tag
I79_010658
See related
Ensembl:ENSCGRG00015009068
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 1
Exon count:
14
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613999.1 (904562..944406)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 1 Unlocalized Scaffold NW_023276807.1 (1894477..1950898, complement)

NW_003613999.1Genomic Context describing neighboring genes Neighboring gene septin 10 Neighboring gene sosondowah ankyrin repeat domain family member C Neighboring gene phospholipase A2 group XIIB Neighboring gene uncharacterized LOC118239622 Neighboring gene oncoprotein induced transcript 3

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ascorbic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables procollagen-proline 4-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptidyl-proline hydroxylation to 4-hydroxy-L-proline IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
prolyl 4-hydroxylase subunit alpha-1
Names
Prolyl 4-hydroxylase subunit alpha-1
prolyl 4-hydroxylase, alpha polypeptide I

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613999.1 Reference CriGri_1.0 Primary Assembly

    Range
    904562..944406
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003503746.4 → XP_003503794.1  prolyl 4-hydroxylase subunit alpha-1 isoform X1

    See identical proteins and their annotated locations for XP_003503794.1

    UniProtKB/TrEMBL
    A0A8C2LLS9, G3HJ24
    Conserved Domains (4) summary
    smart00702
    Location:345 → 518
    P4Hc; Prolyl 4-hydroxylase alpha subunit homologues
    sd00006
    Location:164 → 199
    TPR; TPR repeat [structural motif]
    pfam08336
    Location:24 → 153
    P4Ha_N; Prolyl 4-Hydroxylase alpha-subunit, N-terminal region
    cl21750
    Location:210 → 255
    Fis1; Mitochondrial Fission Protein Fis1, cytosolic domain

Alternate CriGri-PICRH-1.0

Genomic

  1. NW_023276807.1 Alternate CriGri-PICRH-1.0

    Range
    1894477..1950898 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027388332.2 → XP_027244133.1  prolyl 4-hydroxylase subunit alpha-1 isoform X1

    UniProtKB/TrEMBL
    A0A8C2LLS9, G3HJ24
    Related
    ENSCGRP00015011874.1, ENSCGRT00015014548.2

  2. XM_027388333.2 → XP_027244134.1  prolyl 4-hydroxylase subunit alpha-1 isoform X2

    UniProtKB/TrEMBL
    A0A8C2QE13, G3HJ24
    Related
    ENSCGRP00015011901.1, ENSCGRT00015014589.2
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.