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Slc13a1 solute carrier family 13 member 1 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100757983, updated on 8-Mar-2024

Summary

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Gene symbol
Slc13a1
Gene description
solute carrier family 13 member 1
Locus tag
I79_008611
See related
Ensembl:ENSCGRG00015027220
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
15
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613878.1 (45885..130158, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 1 Unlocalized Scaffold NW_023276806.1 (203220743..203305195)

NW_003613878.1Genomic Context describing neighboring genes Neighboring gene IQ motif and ubiquitin domain containing Neighboring gene NADH:ubiquinone oxidoreductase subunit A5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sodium:sulfate symporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in monoatomic anion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sulfate transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
solute carrier family 13 member 1
Names
solute carrier family 13 (sodium/sulfate symporter), member 1
solute carrier family 13 (sodium/sulfate symporters), member 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613878.1 Reference CriGri_1.0 Primary Assembly

    Range
    45885..130158 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003502122.3 → XP_003502170.1  solute carrier family 13 member 1

    See identical proteins and their annotated locations for XP_003502170.1

    UniProtKB/TrEMBL
    A0A061INY8, A0A8C2LMT7
    Conserved Domains (2) summary
    COG0471
    Location:40 → 573
    CitT; Di- and tricarboxylate transporter [Carbohydrate transport and metabolism]
    cl21473
    Location:32 → 572
    ArsB_NhaD_permease; Anion permease ArsB/NhaD. These permeases have been shown to translocate sodium, arsenate, antimonite, sulfate and organic anions across biological membranes in all three kingdoms of life. A typical anion permease contains 8-13 transmembrane helices ...

Alternate CriGri-PICRH-1.0

Genomic

  1. NW_023276806.1 Alternate CriGri-PICRH-1.0

    Range
    203220743..203305195
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027390000.2 → XP_027245801.1  solute carrier family 13 member 1

    UniProtKB/TrEMBL
    A0A061INY8, A0A8C2LMT7
    Related
    ENSCGRP00015036322.1, ENSCGRT00015044280.2
Nucleotide Protein Strain
Heading Accession and Version

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