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Ndst2 N-deacetylase and N-sulfotransferase 2 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100758914, updated on 8-Mar-2024

Summary

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Gene symbol
Ndst2
Gene description
N-deacetylase and N-sulfotransferase 2
Locus tag
I79_002174
See related
Ensembl:ENSCGRG00015016437
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
16
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613632.1 (142984..153245, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 1 Unlocalized Scaffold NW_023276807.1 (200249843..200260153)

NW_003613632.1Genomic Context describing neighboring genes Neighboring gene coiled-coil-helix-coiled-coil-helix domain containing 1 Neighboring gene zinc finger SWIM-type containing 8 Neighboring gene calcium/calmodulin dependent protein kinase II gamma Neighboring gene plasminogen activator, urokinase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine N-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables deacetylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 2
Names
Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 2
N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2
N-deacetylase/N-sulfotransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613632.1 Reference CriGri_1.0 Primary Assembly

    Range
    142984..153245 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027384739.2 → XP_027240540.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 2 isoform X2

    UniProtKB/TrEMBL
    A0A9J7J7M6, G3GWP5

  2. XM_007652664.3 → XP_007650854.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 2 isoform X1

    See identical proteins and their annotated locations for XP_007650854.1

    UniProtKB/TrEMBL
    A0A3L7IN93, G3GWP5
    Conserved Domains (2) summary
    pfam00685
    Location:603 → 852
    Sulfotransfer_1; Sulfotransferase domain
    pfam12062
    Location:26 → 514
    HSNSD; heparan sulfate-N-deacetylase

  3. XM_027384736.2 → XP_027240537.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 2 isoform X1

    UniProtKB/TrEMBL
    A0A3L7IN93, G3GWP5

Alternate CriGri-PICRH-1.0

Genomic

  1. NW_023276807.1 Alternate CriGri-PICRH-1.0

    Range
    200249843..200260153
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027387542.2 → XP_027243343.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 2 isoform X1

    UniProtKB/TrEMBL
    A0A3L7IN93, G3GWP5

  2. XM_027387541.2 → XP_027243342.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 2 isoform X1

    UniProtKB/TrEMBL
    A0A3L7IN93, G3GWP5
    Related
    ENSCGRP00015021579.1, ENSCGRT00015026503.2

  3. XM_027387543.2 → XP_027243344.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 2 isoform X2

    UniProtKB/TrEMBL
    A0A9J7J7M6, G3GWP5
Nucleotide Protein Strain
Heading Accession and Version

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