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Aco2 aconitase 2 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100759203, updated on 8-Mar-2024

Summary

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Gene symbol
Aco2
Gene description
aconitase 2
See related
Ensembl:ENSCGRG00015005756
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
18
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003616508.1 (39182..83477)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 2 NC_048595.1 (379009674..379054098)

NW_003616508.1Genomic Context describing neighboring genes Neighboring gene transducer of ERBB2, 2 Neighboring gene PHD finger protein 5A Neighboring gene RNA polymerase III subunit H Neighboring gene cold shock domain containing C2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Prediction of transcribed PIWI-interacting RNAs from CHO RNAseq data. Gerstl MP, et al. J Biotechnol, 2013 Jun 20. PMID 23639388
  2. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 4 iron, 4 sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables aconitate hydratase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tricarboxylic acid cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
aconitate hydratase, mitochondrial
Names
Aconitate hydratase, mitochondrial
aconitase 2, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003616508.1 Reference CriGri_1.0 Primary Assembly

    Range
    39182..83477
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003514310.4 → XP_003514358.1  aconitate hydratase, mitochondrial

    See identical proteins and their annotated locations for XP_003514358.1

    UniProtKB/TrEMBL
    A0A8C2QP39, G3II47
    Conserved Domains (3) summary
    cd01584
    Location:95 → 505
    AcnA_Mitochondrial; Aconitase catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA cycle
    cd01578
    Location:587 → 735
    AcnA_Mitochon_Swivel; Mitochondrial aconitase A swivel domain. Aconitase (also known as aconitate hydratase and citrate hydro-lyase) catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA cycle. This is the aconitase swivel domain, which undergoes ...
    TIGR01340
    Location:45 → 775
    aconitase_mito; aconitate hydratase, mitochondrial

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048595.1 Alternate CriGri-PICRH-1.0

    Range
    379009674..379054098
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027404091.2 → XP_027259892.1  aconitate hydratase, mitochondrial

    UniProtKB/TrEMBL
    A0A8C2QP39, G3II47
    Related
    ENSCGRP00015007414.1, ENSCGRT00015009135.2
Nucleotide Protein Strain
Heading Accession and Version

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