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Plcb3 phospholipase C beta 3 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100760134, updated on 8-Mar-2024

Summary

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Gene symbol
Plcb3
Gene description
phospholipase C beta 3
Locus tag
I79_019745
See related
Ensembl:ENSCGRG00015010838
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See Plcb3 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
31
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003615068.1 (297443..312566)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 3 NC_048596.1 (52483349..52504624)

NW_003615068.1Genomic Context describing neighboring genes Neighboring gene FKBP prolyl isomerase 2 Neighboring gene protein phosphatase 1 regulatory inhibitor subunit 14B Neighboring gene BCL2 associated agonist of cell death Neighboring gene G protein-coupled receptor 137

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calmodulin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol phospholipase C activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphatidylinositol-mediated signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3
Names
1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-3
1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-3-like protein
phospholipase C, beta 3 (phosphatidylinositol-specific)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003615068.1 Reference CriGri_1.0 Primary Assembly

    Range
    297443..312566
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035461718.1 → XP_035317609.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 isoform X1

    UniProtKB/TrEMBL
    G3I883
    Conserved Domains (5) summary
    cd00275
    Location:728 → 843
    C2_PLC_like; C2 domain present in Phosphoinositide-specific phospholipases C (PLC)
    cd08591
    Location:316 → 693
    PI-PLCc_beta; Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta
    cd13361
    Location:22 → 149
    PH_PLC_beta; Phospholipase C-beta (PLC-beta) pleckstrin homology (PH) domain
    cd16210
    Location:154 → 304
    EFh_PI-PLCbeta3; EF-hand motif found in phosphoinositide phospholipase C beta 3 (PI-PLC-beta3)
    pfam08703
    Location:1028 → 1201
    PLC-beta_C; PLC-beta C terminal

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048596.1 Alternate CriGri-PICRH-1.0

    Range
    52483349..52504624
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035442005.1 → XP_035297896.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 isoform X3

    UniProtKB/TrEMBL
    A0A9J7FP61, G3I883
    Related
    ENSCGRP00015014094.2, ENSCGRT00015017255.2
    Conserved Domains (5) summary
    cd00275
    Location:670 → 785
    C2_PLC_like; C2 domain present in Phosphoinositide-specific phospholipases C (PLC)
    cd08591
    Location:258 → 635
    PI-PLCc_beta; Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta
    cd13361
    Location:1 → 91
    PH_PLC_beta; Phospholipase C-beta (PLC-beta) pleckstrin homology (PH) domain
    cd16210
    Location:96 → 246
    EFh_PI-PLCbeta3; EF-hand motif found in phosphoinositide phospholipase C beta 3 (PI-PLC-beta3)
    pfam08703
    Location:970 → 1143
    PLC-beta_C; PLC-beta C terminal

  2. XM_027408442.2 → XP_027264243.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 isoform X2

    UniProtKB/TrEMBL
    A0A8C2MC97, G3I883

  3. XM_027408441.2 → XP_027264242.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 isoform X2

    UniProtKB/TrEMBL
    A0A8C2MC97, G3I883
    Related
    ENSCGRP00015014135.1, ENSCGRT00015017302.2

  4. XM_027408443.2 → XP_027264244.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 isoform X3

    UniProtKB/TrEMBL
    A0A9J7FP61, G3I883
    Conserved Domains (5) summary
    cd00275
    Location:670 → 785
    C2_PLC_like; C2 domain present in Phosphoinositide-specific phospholipases C (PLC)
    cd08591
    Location:258 → 635
    PI-PLCc_beta; Catalytic domain of metazoan phosphoinositide-specific phospholipase C-beta
    cd13361
    Location:1 → 91
    PH_PLC_beta; Phospholipase C-beta (PLC-beta) pleckstrin homology (PH) domain
    cd16210
    Location:96 → 246
    EFh_PI-PLCbeta3; EF-hand motif found in phosphoinositide phospholipase C beta 3 (PI-PLC-beta3)
    pfam08703
    Location:970 → 1143
    PLC-beta_C; PLC-beta C terminal
Nucleotide Protein Strain
Heading Accession and Version

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