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Slco3a1 solute carrier organic anion transporter family member 3A1 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100760145, updated on 8-Mar-2024

Summary

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Gene symbol
Slco3a1
Gene description
solute carrier organic anion transporter family member 3A1
Locus tag
I79_000469
See related
Ensembl:ENSCGRG00015021898
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
10
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613588.1 (5031049..5249943, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 3 NC_048596.1 (122753519..123032732)

NW_003613588.1Genomic Context describing neighboring genes Neighboring gene 28S ribosomal protein S21, mitochondrial-like Neighboring gene alpha-enolase-like Neighboring gene actin, cytoplasmic 2-like Neighboring gene 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sodium-independent organic anion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in prostaglandin transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sodium-independent organic anion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
solute carrier organic anion transporter family member 3A1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613588.1 Reference CriGri_1.0 Primary Assembly

    Range
    5031049..5249943 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003495276.3 → XP_003495324.1  solute carrier organic anion transporter family member 3A1 isoform X1

    See identical proteins and their annotated locations for XP_003495324.1

    Conserved Domains (3) summary
    cd06174
    Location:13 → 237
    MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
    cd01330
    Location:418 → 462
    KAZAL_SLC21; The kazal-type serine protease inhibitor domain has been detected in an extracellular loop region of solute carrier 21 (SLC21) family members (organic anion transporters) , which may regulate the specificity of anion uptake. The KAZAL_SLC21 domain is a ...
    pfam03137
    Location:12 → 570
    OATP; Organic Anion Transporter Polypeptide (OATP) family

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048596.1 Alternate CriGri-PICRH-1.0

    Range
    122753519..123032732
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027408151.2 → XP_027263952.1  solute carrier organic anion transporter family member 3A1 isoform X2

    UniProtKB/TrEMBL
    A0A9J7FMA7
    Related
    ENSCGRP00015029072.1, ENSCGRT00015035586.2

  2. XM_027408153.2 → XP_027263954.1  solute carrier organic anion transporter family member 3A1 isoform X4

    UniProtKB/TrEMBL
    A0A8C2QKC8
    Related
    ENSCGRP00015029044.1, ENSCGRT00015035556.2

  3. XM_027408152.2 → XP_027263953.1  solute carrier organic anion transporter family member 3A1 isoform X3

    UniProtKB/TrEMBL
    A0A8C2MEG8
    Related
    ENSCGRP00015029061.2, ENSCGRT00015035575.2
Nucleotide Protein Strain
Heading Accession and Version

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