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Slc6a1 solute carrier family 6 member 1 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100760370, updated on 8-Mar-2024

Summary

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Gene symbol
Slc6a1
Gene description
solute carrier family 6 member 1
See related
Ensembl:ENSCGRG00015001893
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 8
Exon count:
14
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613637.1 (1363730..1378272)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 8 NC_048601.1 (30477125..30491619, complement)

NW_003613637.1Genomic Context describing neighboring genes Neighboring gene ATPase plasma membrane Ca2+ transporting 2 Neighboring gene solute carrier family 6 member 11 Neighboring gene ubiquitin-like modifier-activating enzyme ATG7 Neighboring gene histamine receptor H1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables gamma-aminobutyric acid:sodium:chloride symporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in neurotransmitter transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sodium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in axon IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sodium- and chloride-dependent GABA transporter 1
Names
Sodium- and chloride-dependent GABA transporter 1
solute carrier family 6 (neurotransmitter transporter), member 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613637.1 Reference CriGri_1.0 Primary Assembly

    Range
    1363730..1378272
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035437639.1 → XP_035293530.1  sodium- and chloride-dependent GABA transporter 1

    UniProtKB/TrEMBL
    G3GX47
    Conserved Domains (1) summary
    cd11506
    Location:2 → 599
    SLC6sbd_GAT1; Na(+)- and Cl(-)-dependent GABA transporter 1; solute-binding domain

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048601.1 Alternate CriGri-PICRH-1.0

    Range
    30477125..30491619 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035448657.1 → XP_035304548.1  sodium- and chloride-dependent GABA transporter 1

    UniProtKB/TrEMBL
    G3GX47
    Related
    ENSCGRP00015002367.1, ENSCGRT00015002938.2
    Conserved Domains (1) summary
    cd11506
    Location:2 → 599
    SLC6sbd_GAT1; Na(+)- and Cl(-)-dependent GABA transporter 1; solute-binding domain
Nucleotide Protein Strain
Heading Accession and Version

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