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Acsl4 acyl-CoA synthetase long chain family member 4 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100760496, updated on 8-Mar-2024

Summary

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Gene symbol
Acsl4
Gene description
acyl-CoA synthetase long chain family member 4
Locus tag
I79_012377
See related
Ensembl:ENSCGRG00015016363
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: X
Exon count:
16
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614126.1 (104095..155492)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) X NC_048604.1 (38176576..38251298)

NW_003614126.1Genomic Context describing neighboring genes Neighboring gene elongin-B-like Neighboring gene ubiquitin carboxyl-terminal hydrolase 1-like Neighboring gene NTF2-related export protein 2 Neighboring gene U1 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables arachidonate-CoA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in long-chain fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in long-chain fatty-acyl-CoA metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuron differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lipid droplet IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
long-chain-fatty-acid--CoA ligase 4
Names
Long-chain-fatty-acid--CoA ligase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614126.1 Reference CriGri_1.0 Primary Assembly

    Range
    104095..155492
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007645730.4 → XP_007643920.1  long-chain-fatty-acid--CoA ligase 4 isoform X2

    See identical proteins and their annotated locations for XP_007643920.1

    UniProtKB/TrEMBL
    A0A8C2QFM4
    Conserved Domains (2) summary
    cd05927
    Location:80 → 667
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)
    PLN02387
    Location:24 → 667
    PLN02387; long-chain-fatty-acid-CoA ligase family protein

  2. XM_007645728.4 → XP_007643918.1  long-chain-fatty-acid--CoA ligase 4 isoform X1

    See identical proteins and their annotated locations for XP_007643918.1

    UniProtKB/TrEMBL
    A0A8C2QFM4
    Conserved Domains (2) summary
    cd05927
    Location:121 → 708
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)
    PLN02387
    Location:32 → 708
    PLN02387; long-chain-fatty-acid-CoA ligase family protein

  3. XM_016977025.3 → XP_016832514.1  long-chain-fatty-acid--CoA ligase 4 isoform X2

    UniProtKB/TrEMBL
    A0A8C2QFM4
    Conserved Domains (2) summary
    cd05927
    Location:80 → 667
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)
    PLN02387
    Location:24 → 667
    PLN02387; long-chain-fatty-acid-CoA ligase family protein

  4. XM_007645731.4 → XP_007643921.1  long-chain-fatty-acid--CoA ligase 4 isoform X2

    See identical proteins and their annotated locations for XP_007643921.1

    UniProtKB/TrEMBL
    A0A8C2QFM4
    Conserved Domains (2) summary
    cd05927
    Location:80 → 667
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)
    PLN02387
    Location:24 → 667
    PLN02387; long-chain-fatty-acid-CoA ligase family protein

  5. XM_007645729.4 → XP_007643919.1  long-chain-fatty-acid--CoA ligase 4 isoform X1

    See identical proteins and their annotated locations for XP_007643919.1

    UniProtKB/TrEMBL
    A0A8C2QFM4
    Conserved Domains (2) summary
    cd05927
    Location:121 → 708
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)
    PLN02387
    Location:32 → 708
    PLN02387; long-chain-fatty-acid-CoA ligase family protein

  6. XM_007645732.4 → XP_007643922.1  long-chain-fatty-acid--CoA ligase 4 isoform X2

    See identical proteins and their annotated locations for XP_007643922.1

    UniProtKB/TrEMBL
    A0A8C2QFM4
    Conserved Domains (2) summary
    cd05927
    Location:80 → 667
    LC-FACS_euk; Eukaryotic long-chain fatty acid CoA synthetase (LC-FACS)
    PLN02387
    Location:24 → 667
    PLN02387; long-chain-fatty-acid-CoA ligase family protein

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048604.1 Alternate CriGri-PICRH-1.0

    Range
    38176576..38251298
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027433637.1 → XP_027289438.1  long-chain-fatty-acid--CoA ligase 4 isoform X3

    UniProtKB/TrEMBL
    A0A8C2M8S7, A0A8C2QFM4

  2. XM_027433639.1 → XP_027289440.1  long-chain-fatty-acid--CoA ligase 4 isoform X3

    UniProtKB/TrEMBL
    A0A8C2M8S7, A0A8C2QFM4

  3. XM_027433638.1 → XP_027289439.1  long-chain-fatty-acid--CoA ligase 4 isoform X3

    UniProtKB/TrEMBL
    A0A8C2M8S7, A0A8C2QFM4
    Related
    ENSCGRP00015021487.2, ENSCGRT00015026393.2

  4. XM_027433640.1 → XP_027289441.1  long-chain-fatty-acid--CoA ligase 4 isoform X4

    UniProtKB/TrEMBL
    A0A8C2QFM4, A0A9J7GKD9

  5. XM_027433643.1 → XP_027289444.1  long-chain-fatty-acid--CoA ligase 4 isoform X4

    UniProtKB/TrEMBL
    A0A8C2QFM4, A0A9J7GKD9

  6. XM_027433642.1 → XP_027289443.1  long-chain-fatty-acid--CoA ligase 4 isoform X4

    UniProtKB/TrEMBL
    A0A8C2QFM4, A0A9J7GKD9

  7. XM_027433645.1 → XP_027289446.1  long-chain-fatty-acid--CoA ligase 4 isoform X4

    UniProtKB/TrEMBL
    A0A8C2QFM4, A0A9J7GKD9

  8. XM_027433641.1 → XP_027289442.1  long-chain-fatty-acid--CoA ligase 4 isoform X4

    UniProtKB/TrEMBL
    A0A8C2QFM4, A0A9J7GKD9

  9. XM_027433644.1 → XP_027289445.1  long-chain-fatty-acid--CoA ligase 4 isoform X4

    UniProtKB/TrEMBL
    A0A8C2QFM4, A0A9J7GKD9
Nucleotide Protein Strain
Heading Accession and Version

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