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LOC100760661 acidic mammalian chitinase [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100760661, updated on 19-Dec-2023

Summary

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Gene symbol
LOC100760661
Gene description
acidic mammalian chitinase
Locus tag
I79_023603
See related
Ensembl:ENSCGRG00015027073
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
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Genomic context

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Location:
chromosome: 1
Exon count:
11
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003616563.1 (58531..72129, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 1 Unlocalized Scaffold NW_023276806.1 (50919476..50932422, complement)

NW_003616563.1Genomic Context describing neighboring genes Neighboring gene chitinase-like protein 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables chitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chitin catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
acidic mammalian chitinase
Names
acidic mammalian chitinase-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003616563.1 Reference CriGri_1.0 Primary Assembly

    Range
    58531..72129 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027385555.2 → XP_027241356.2  acidic mammalian chitinase isoform X1

    UniProtKB/TrEMBL
    G3IID5
    Conserved Domains (2) summary
    cd02872
    Location:24 → 387
    GH18_chitolectin_chitotriosidase; This conserved domain family includes a large number of catalytically inactive chitinase-like lectins (chitolectins) including YKL-39, YKL-40 (HCGP39), YM1, oviductin, and AMCase (acidic mammalian chitinase), as well as catalytically active ...
    smart00494
    Location:430 → 477
    ChtBD2; Chitin-binding domain type 2

Alternate CriGri-PICRH-1.0

Genomic

  1. NW_023276806.1 Alternate CriGri-PICRH-1.0

    Range
    50919476..50932422 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027393521.2 → XP_027249322.1  acidic mammalian chitinase isoform X2

    UniProtKB/TrEMBL
    A0A8C2MKL8, G3IID5
    Related
    ENSCGRP00015036093.1, ENSCGRT00015044007.2
Nucleotide Protein Strain
Heading Accession and Version

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