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P4ha2 prolyl 4-hydroxylase subunit alpha 2 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100760683, updated on 8-Mar-2024

Summary

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Gene symbol
P4ha2
Gene description
prolyl 4-hydroxylase subunit alpha 2
Locus tag
I79_005437
See related
Ensembl:ENSCGRG00015023630
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 7
Exon count:
18
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613733.1 (87933..128197)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 7 NC_048600.1 (68255680..68299846)

NW_003613733.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 22 member 4 Neighboring gene U6 spliceosomal RNA Neighboring gene PDZ and LIM domain 4 Neighboring gene tubulin alpha-1B chain-like Neighboring gene colony stimulating factor 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ascorbic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables procollagen-proline 4-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptidyl-proline hydroxylation to 4-hydroxy-L-proline IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
prolyl 4-hydroxylase subunit alpha-2
Names
Prolyl 4-hydroxylase subunit alpha-2
procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha II polypeptide
prolyl 4-hydroxylase, alpha polypeptide II

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613733.1 Reference CriGri_1.0 Primary Assembly

    Range
    87933..128197
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007640133.4 → XP_007638323.1  prolyl 4-hydroxylase subunit alpha-2 isoform X5

    UniProtKB/TrEMBL
    A0A8C2M044
    Conserved Domains (2) summary
    smart00702
    Location:411 → 604
    P4Hc; Prolyl 4-hydroxylase alpha subunit homologues
    pfam08336
    Location:91 → 220
    P4Ha_N; Prolyl 4-Hydroxylase alpha-subunit, N-terminal region

  2. XM_003499378.5 → XP_003499426.2  prolyl 4-hydroxylase subunit alpha-2 isoform X2

    UniProtKB/TrEMBL
    A0A8C2M044
    Conserved Domains (2) summary
    smart00702
    Location:411 → 582
    P4Hc; Prolyl 4-hydroxylase alpha subunit homologues
    pfam08336
    Location:91 → 220
    P4Ha_N; Prolyl 4-Hydroxylase alpha-subunit, N-terminal region

  3. XM_007640130.4 → XP_007638320.1  prolyl 4-hydroxylase subunit alpha-2 isoform X1

    UniProtKB/TrEMBL
    A0A8C2M044
    Conserved Domains (2) summary
    smart00702
    Location:411 → 584
    P4Hc; Prolyl 4-hydroxylase alpha subunit homologues
    pfam08336
    Location:91 → 220
    P4Ha_N; Prolyl 4-Hydroxylase alpha-subunit, N-terminal region

  4. XM_003499377.5 → XP_003499425.2  prolyl 4-hydroxylase subunit alpha-2 isoform X3

    UniProtKB/TrEMBL
    A0A8C2M044
    Conserved Domains (2) summary
    smart00702
    Location:366 → 539
    P4Hc; Prolyl 4-hydroxylase alpha subunit homologues
    pfam08336
    Location:46 → 175
    P4Ha_N; Prolyl 4-Hydroxylase alpha-subunit, N-terminal region

  5. XM_007640131.3 → XP_007638321.1  prolyl 4-hydroxylase subunit alpha-2 isoform X4

    See identical proteins and their annotated locations for XP_007638321.1

    UniProtKB/TrEMBL
    A0A8C2M044
    Conserved Domains (2) summary
    smart00702
    Location:346 → 519
    P4Hc; Prolyl 4-hydroxylase alpha subunit homologues
    pfam08336
    Location:26 → 155
    P4Ha_N; Prolyl 4-Hydroxylase alpha-subunit, N-terminal region

  6. XM_007640132.3 → XP_007638322.1  prolyl 4-hydroxylase subunit alpha-2 isoform X4

    See identical proteins and their annotated locations for XP_007638322.1

    UniProtKB/TrEMBL
    A0A8C2M044
    Conserved Domains (2) summary
    smart00702
    Location:346 → 519
    P4Hc; Prolyl 4-hydroxylase alpha subunit homologues
    pfam08336
    Location:26 → 155
    P4Ha_N; Prolyl 4-Hydroxylase alpha-subunit, N-terminal region

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048600.1 Alternate CriGri-PICRH-1.0

    Range
    68255680..68299846
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027427513.2 → XP_027283314.1  prolyl 4-hydroxylase subunit alpha-2 isoform X5

    UniProtKB/TrEMBL
    A0A8C2M044, A0A9J7GEC4

  2. XM_027427508.2 → XP_027283309.1  prolyl 4-hydroxylase subunit alpha-2 isoform X2

    UniProtKB/TrEMBL
    A0A8C2M044, A0A9J7JVY3

  3. XM_027427507.2 → XP_027283308.1  prolyl 4-hydroxylase subunit alpha-2 isoform X1

    UniProtKB/TrEMBL
    A0A8C2M044, A0A9J7GEC8
    Related
    ENSCGRP00015031360.2, ENSCGRT00015038315.2

  4. XM_027427509.2 → XP_027283310.1  prolyl 4-hydroxylase subunit alpha-2 isoform X3

    UniProtKB/TrEMBL
    A0A8C2M044, A0A9J7GEC2

  5. XM_027427511.2 → XP_027283312.1  prolyl 4-hydroxylase subunit alpha-2 isoform X4

    UniProtKB/TrEMBL
    A0A8C2M028, A0A8C2M044

  6. XM_027427512.2 → XP_027283313.1  prolyl 4-hydroxylase subunit alpha-2 isoform X4

    UniProtKB/TrEMBL
    A0A8C2M028, A0A8C2M044

  7. XM_027427510.2 → XP_027283311.1  prolyl 4-hydroxylase subunit alpha-2 isoform X4

    UniProtKB/TrEMBL
    A0A8C2M028, A0A8C2M044
    Related
    ENSCGRP00015031446.2, ENSCGRT00015038410.2
Nucleotide Protein Strain
Heading Accession and Version

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