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Slc6a5 solute carrier family 6 member 5 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100761450, updated on 8-Mar-2024

Summary

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Gene symbol
Slc6a5
Gene description
solute carrier family 6 member 5
Locus tag
I79_008809
See related
Ensembl:ENSCGRG00015017471
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
16
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613888.1 (94389..146818, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 3 NC_048596.1 (146946927..146999328)

NW_003613888.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC113835114 Neighboring gene protein arginine methyltransferase 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycine:sodium symporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycine import across plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sodium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synaptic transmission, glycinergic IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sodium- and chloride-dependent glycine transporter 2
Names
Sodium- and chloride-dependent glycine transporter 2
solute carrier family 6 (neurotransmitter transporter), member 5
solute carrier family 6 (neurotransmitter transporter, glycine), member 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613888.1 Reference CriGri_1.0 Primary Assembly

    Range
    94389..146818 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007642878.3 → XP_007641068.1  sodium- and chloride-dependent glycine transporter 2 isoform X1

    UniProtKB/TrEMBL
    A0A8C2MZ07
    Conserved Domains (1) summary
    cd11499
    Location:185 → 781
    SLC6sbd_GlyT2; Na(+)- and Cl(-)-dependent glycine transporter GlyT2; solute-binding domain

  2. XM_007642879.3 → XP_007641069.1  sodium- and chloride-dependent glycine transporter 2 isoform X2

    UniProtKB/TrEMBL
    A0A8C2MZ07
    Conserved Domains (1) summary
    cd11499
    Location:182 → 778
    SLC6sbd_GlyT2; Na(+)- and Cl(-)-dependent glycine transporter GlyT2; solute-binding domain

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048596.1 Alternate CriGri-PICRH-1.0

    Range
    146946927..146999328
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027410507.2 → XP_027266308.1  sodium- and chloride-dependent glycine transporter 2 isoform X3

    UniProtKB/TrEMBL
    A0A8C2MZ07, A0A9J7FTX0
    Related
    ENSCGRP00015023080.2, ENSCGRT00015028303.2
Nucleotide Protein Strain
Heading Accession and Version

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