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Alox12b arachidonate 12-lipoxygenase, 12R type [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100761707, updated on 8-Mar-2024

Summary

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Gene symbol
Alox12b
Gene description
arachidonate 12-lipoxygenase, 12R type
See related
Ensembl:ENSCGRG00015011199
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 7
Exon count:
15
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613643.1 (1239337..1251357)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 7 NC_048600.1 (83030140..83042253)

NW_003613643.1Genomic Context describing neighboring genes Neighboring gene transfer RNA lysine (anticodon UUU) Neighboring gene arachidonate lipoxygenase 3 Neighboring gene arachidonate 15-lipoxygenase type B Neighboring gene guanylate cyclase 2D, retinal

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables arachidonate 12(S)-lipoxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in linoleic acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid oxidation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in perinuclear region of cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
arachidonate 12-lipoxygenase, 12R-type
Names
epidermis-type lipoxygenase 3-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613643.1 Reference CriGri_1.0 Primary Assembly

    Range
    1239337..1251357
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035439343.1 → XP_035295234.1  arachidonate 12-lipoxygenase, 12R-type isoform X1

    Conserved Domains (2) summary
    pfam00305
    Location:121 → 639
    Lipoxygenase
    cl00011
    Location:7 → 74
    PLAT; PLAT (Polycystin-1, Lipoxygenase, Alpha-Toxin) domain or LH2 (Lipoxygenase homology 2) domain. It consists of an eight stranded beta-barrel. The domain can be found in various domain architectures, in case of lipoxygenases, alpha toxin, lipases and ...

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048600.1 Alternate CriGri-PICRH-1.0

    Range
    83030140..83042253
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027427046.2 → XP_027282847.1  arachidonate 12-lipoxygenase, 12R-type isoform X2

    UniProtKB/TrEMBL
    A0A8C2N2Q3
    Related
    ENSCGRP00015014561.1, ENSCGRT00015017841.2
Nucleotide Protein Strain
Heading Accession and Version

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