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LOC100762019 solute carrier family 22 member 4 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100762019, updated on 19-Dec-2023

Summary

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Gene symbol
LOC100762019
Gene description
solute carrier family 22 member 4
Locus tag
I79_005434
See related
Ensembl:ENSCGRG00015023797
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Annotation information
Annotation category: partial on reference assembly
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Genomic context

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Location:
chromosome: 7
Exon count:
7
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613733.1 (1945..30818, complement)
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003615392.1 (16418..34513)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 7 NC_048600.1 (68143461..68197755, complement)

NW_003615392.1Genomic Context describing neighboring genes Neighboring gene spermatogenesis-associated protein 4-like Neighboring gene solute carrier family 22 member 21

NW_003613733.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene PDZ and LIM domain 4 Neighboring gene prolyl 4-hydroxylase subunit alpha 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
solute carrier family 22 member 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613733.1 Reference CriGri_1.0 Primary Assembly

    Range
    1945..30818 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003499381.3 → XP_003499429.3  solute carrier family 22 member 4 isoform X2

    UniProtKB/TrEMBL
    G3H562
    Conserved Domains (1) summary
    TIGR00898
    Location:12 → 218
    2A0119; cation transport protein

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003615392.1 Reference CriGri_1.0 Primary Assembly

    Range
    16418..34513
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016980528.2 → XP_016836017.2  solute carrier family 22 member 4 isoform X1

    UniProtKB/TrEMBL
    A0A9J7GHV5
    Conserved Domains (1) summary
    cl28910
    Location:1 → 334
    MFS; Major Facilitator Superfamily

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048600.1 Alternate CriGri-PICRH-1.0

    Range
    68143461..68197755 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027427514.2 → XP_027283315.1  solute carrier family 22 member 4 isoform X3

    UniProtKB/TrEMBL
    A0A8C2MLG3
    Related
    ENSCGRP00015031572.2, ENSCGRT00015038570.2

  2. XM_027427516.2 → XP_027283317.1  solute carrier family 22 member 4 isoform X4

    UniProtKB/TrEMBL
    A0A9J7GHV5
    Conserved Domains (1) summary
    cl28910
    Location:1 → 334
    MFS; Major Facilitator Superfamily

  3. XM_027427515.2 → XP_027283316.1  solute carrier family 22 member 4 isoform X4

    UniProtKB/TrEMBL
    A0A9J7GHV5
    Conserved Domains (1) summary
    cl28910
    Location:1 → 334
    MFS; Major Facilitator Superfamily
Nucleotide Protein Strain
Heading Accession and Version

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