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Sphk1 sphingosine kinase 1 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100762053, updated on 8-Mar-2024

Summary

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Gene symbol
Sphk1
Gene description
sphingosine kinase 1
See related
Ensembl:ENSCGRG00015038314
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 7
Exon count:
6
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614300.1 (609327..613264)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 7 NC_048600.1 (129110436..129114591)

NW_003614300.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC118239157 Neighboring gene uncharacterized LOC118239960 Neighboring gene ubiquitin conjugating enzyme E2 O Neighboring gene aralkylamine N-acetyltransferase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables D-erythro-sphingosine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to growth factor stimulus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sphingosine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in intracellular membrane-bounded organelle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sphingosine kinase 1
Names
sphingosine kinase 2-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614300.1 Reference CriGri_1.0 Primary Assembly

    Range
    609327..613264
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007647372.3 → XP_007645562.1  sphingosine kinase 1 isoform X1

    See identical proteins and their annotated locations for XP_007645562.1

    UniProtKB/TrEMBL
    G3HTX9
    Conserved Domains (2) summary
    PLN02958
    Location:11 → 345
    PLN02958; diacylglycerol kinase/D-erythro-sphingosine kinase
    pfam00781
    Location:16 → 155
    DAGK_cat; Diacylglycerol kinase catalytic domain

  2. XM_027439645.2 → XP_027295446.1  sphingosine kinase 1 isoform X2

    UniProtKB/TrEMBL
    A0A9J7JWD2

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048600.1 Alternate CriGri-PICRH-1.0

    Range
    129110436..129114591
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027425586.2 → XP_027281387.1  sphingosine kinase 1 isoform X1

    UniProtKB/TrEMBL
    G3HTX9
    Related
    ENSCGRP00015051493.1, ENSCGRT00015062298.1

  2. XM_027425587.2 → XP_027281388.1  sphingosine kinase 1 isoform X2

    UniProtKB/TrEMBL
    A0A9J7JWD2
Nucleotide Protein Strain
Heading Accession and Version

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