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Rpn1 ribophorin I [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100762811, updated on 8-Mar-2024

Summary

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Gene symbol
Rpn1
Gene description
ribophorin I
See related
Ensembl:ENSCGRG00015010214
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 8
Exon count:
10
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613981.1 (444683..468116, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 8 NC_048601.1 (55202892..55226781, complement)

NW_003613981.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC118239908 Neighboring gene uncharacterized LOC118239279 Neighboring gene uncharacterized LOC118239909 Neighboring gene RAB7A, member RAS oncogene family Neighboring gene 5-hydroxymethylcytosine binding, ES cell specific

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in protein N-linked glycosylation via asparagine IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of oligosaccharyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1
Names
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613981.1 Reference CriGri_1.0 Primary Assembly

    Range
    444683..468116 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003503554.5 → XP_003503602.1  dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1

    See identical proteins and their annotated locations for XP_003503602.1

    UniProtKB/TrEMBL
    G3HID0
    Conserved Domains (2) summary
    pfam04597
    Location:35 → 459
    Ribophorin_I; Ribophorin I
    pfam10482
    Location:521 → 598
    CtIP_N; Tumour-suppressor protein CtIP N-terminal domain

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048601.1 Alternate CriGri-PICRH-1.0

    Range
    55202892..55226781 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027428690.2 → XP_027284491.1  dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1

    UniProtKB/TrEMBL
    G3HID0
    Related
    ENSCGRP00015013309.1, ENSCGRT00015016287.2
Nucleotide Protein Strain
Heading Accession and Version

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